RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CYP2J2P51589 502 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
TRAF1-203ENST00000546084 FOXR1Q6PIV2 292 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 ALS2CR12Q96Q35 445 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 RIOK1Q9BRS2 568 aaKnown RBP10.85□□□□□ -0.67
TRAF1-203ENST00000546084 PFKFB3Q16875 520 aaPredicted RBP10.85□□□□□ -0.67
TRAF1-203ENST00000546084 SRLQ86TD4 932 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 PIGOQ8TEQ8 1089 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 LSM14BQ9BX40 385 aaKnown RBP10.85□□□□□ -0.67
TRAF1-203ENST00000546084 PLA2G12BQ9BX93 195 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 XDHP47989 1333 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 OVOS2A0A0G2JMS6 1433 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 GCNT3O95395 438 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 HARSP12081 509 aaKnown RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 KRT83P78385 493 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 TMEM132AQ24JP5 1023 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 ANKRD40Q6AI12 368 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 AFAP1L1Q8TED9 768 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 PIK3R5Q8WYR1 880 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 CD209Q9NNX6 404 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 ABHD10Q9NUJ1 306 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 ADD3Q9UEY8 706 aaKnown RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 TULP2O00295 520 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 RNF40O75150 1001 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 DDAH1O94760 285 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 ATP1A1P05023 1023 aaKnown RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 EIF4A3P38919 411 aaKnown RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 WHAMMP3Q1A5X7 153 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 MUM1L1Q5H9M0 696 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 ADAMTS1Q9UHI8 967 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 TTC31Q49AM3 519 aaPredicted RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 ZNF658Q5TYW1 1059 aaPredicted RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 CCDC25Q86WR0 208 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 FAM114A1Q8IWE2 563 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 MICALL1Q8N3F8 863 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 MED15Q96RN5 788 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 CHORDC1Q9UHD1 332 aaPredicted RBP10.84□□□□□ -0.67
TRAF1-203ENST00000546084 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
TRAF1-203ENST00000546084 CEP104O60308 925 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 ALX1Q15699 326 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-203ENST00000546084 FAM133AQ8N9E0 248 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 GLIS3Q8NEA6 775 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 MRRFQ96E11 262 aaKnown RBP10.83□□□□□ -0.68
TRAF1-203ENST00000546084 TMOD2Q9NZR1 351 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 L1RE1Q9UN81 338 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 BICDL2A1A5D9 508 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 RAD17O75943 681 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 MRPL12P52815 198 aaKnown RBP10.83□□□□□ -0.68
TRAF1-203ENST00000546084 GFPT1Q06210 699 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-203ENST00000546084 KRT25Q7Z3Z0 450 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 FAM71BQ8TC56 605 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 P2RX5Q93086 422 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 NHEJ1Q9H9Q4 299 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-203ENST00000546084 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 CAMTA1Q9Y6Y1 1673 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 POTECB2RU33 542 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 H7C1D1 291 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 LRRN2O75325 713 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 PRPF6O94906 941 aaKnown RBP10.83□□□□□ -0.68
TRAF1-203ENST00000546084 KLHL30Q0D2K2 578 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 SEC23AQ15436 765 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 SLF2Q8IX21 1173 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 CUL5Q93034 780 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 PCDHA6Q9UN73 950 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 PCDHA8Q9Y5H6 950 aa10.83□□□□□ -0.68
TRAF1-203ENST00000546084 LOC102724159A0A0B4J2E5 919 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 PPP1R3GB7ZBB8 358 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 KRT13P13646 458 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 SARSP49591 514 aaKnown RBP10.82□□□□□ -0.68
TRAF1-203ENST00000546084 PWP2Q15269 919 aaKnown RBP10.82□□□□□ -0.68
TRAF1-203ENST00000546084 NFRKBQ6P4R8 1299 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 LARP4BQ92615 738 aaKnown RBP10.82□□□□□ -0.68
TRAF1-203ENST00000546084 DDX12PQ92771 950 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 ELMO3Q96BJ8 720 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 RBM17Q96I25 401 aaKnown RBP10.82□□□□□ -0.68
TRAF1-203ENST00000546084 KCNQ5Q9NR82 932 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 PANK4Q9NVE7 773 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 POTEFA5A3E0 1075 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 LRRIQ3A6PVS8 624 aaPredicted RBP10.82□□□□□ -0.68
TRAF1-203ENST00000546084 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 CDR1P51861 262 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 ERVK-24P63145 666 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 ATP2C1P98194 919 aaPredicted RBP10.82□□□□□ -0.68
TRAF1-203ENST00000546084 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 TUBB2AQ13885 445 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
TRAF1-203ENST00000546084 POTEEQ6S8J3 1075 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms