RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 THRAP3Q9Y2W1 955 aaKnown RBP13.69□□□□□ -0.22
COL4A6-209ENST00000545689 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 CDHR2Q9BYE9 1310 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 ATF2P15336 505 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 KIF11P52732 1056 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 ANKRD20A3Q5VUR7 823 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 LRRC63Q05C16 580 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-209ENST00000545689 PALM2Q8IXS6 379 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 RDH13Q8NBN7 331 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 TMEM206Q9H813 350 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 CCDC151A5D8V7 595 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 ALCAMQ13740 583 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 FAM160B1Q5W0V3 765 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 NRBP2Q9NSY0 501 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 USP31Q70CQ4 1352 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 M0QZ92 97 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-209ENST00000545689 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 TOB2Q14106 344 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 CCDC13Q8IYE1 715 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 ACCSQ96QU6 501 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 NR2F2P24468 414 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 DGKHQ86XP1 1220 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 ARHGEF2Q92974 986 aaKnown RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 ALAS1P13196 640 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 IRX4P78413 519 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 RASSF7Q02833 373 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 LRCH2Q5VUJ6 765 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 PPANQ9NQ55 473 aaKnown RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 JRKLQ9Y4A0 524 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 NSFP46459 744 aaKnown RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 PABPC4Q13310 644 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 EXOC8Q8IYI6 725 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 NT5C1BQ96P26 610 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 PIH1D3Q9NQM4 214 aaKnown RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
COL4A6-209ENST00000545689 MRRFQ96E11 262 aaKnown RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
COL4A6-209ENST00000545689 SERPING1P05155 500 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 DYNLL1P63167 89 aaKnown RBP13.67□□□□□ -0.22
COL4A6-209ENST00000545689 KRT81Q14533 505 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 ODR4Q5SWX8 454 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 ATP6V0A1Q93050 837 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 PTK2Q05397 1052 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 GLG1Q92896 1179 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 NACC1Q96RE7 527 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-209ENST00000545689 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 ERFEQ4G0M1 354 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 ARMC9Q7Z3E5 817 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
COL4A6-209ENST00000545689 STRBPQ96SI9 672 aaKnown RBP13.67□□□□□ -0.22
COL4A6-209ENST00000545689 MLXIPQ9HAP2 919 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 GUCY2DQ02846 1103 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 PNMA8AQ86V59 439 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-209ENST00000545689 TTLL11Q8NHH1 800 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
COL4A6-209ENST00000545689 PGRMC1O00264 195 aaKnown RBP13.66□□□□□ -0.22
COL4A6-209ENST00000545689 USP14P54578 494 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 FAM186BQ8IYM0 893 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-209ENST00000545689 GIPC1O14908 333 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 EHHADHQ08426 723 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 TFDP1Q14186 410 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 TCP11X2Q5H9J9 407 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 CSRNP1Q96S65 589 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 CSADQ9Y600 493 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 SLC8A1P32418 973 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 CLNS1AP54105 237 aaKnown RBP13.66□□□□□ -0.22
COL4A6-209ENST00000545689 GEN1Q17RS7 908 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 ALX1Q15699 326 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 IFT122Q9HBG6 1241 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 KAT6BQ8WYB5 2073 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 CA8P35219 290 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 SCNN1DP51172 638 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 TSGA10IPQ3SY00 556 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 ANKRD42Q8N9B4 389 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 CCHCR1Q8TD31 782 aa13.66□□□□□ -0.22
COL4A6-209ENST00000545689 BCAS4Q8TDM0 211 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms