RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	GNE	Q9Y223	722 aa	Known RBP	18.46	■□□□□ 0.55
HMBS-222	ENST00000545621		V9GY48	417 aa	Predicted RBP	18.46	■□□□□ 0.55
HMBS-222	ENST00000545621	WDR81	Q562E7	1941 aa		18.46	■□□□□ 0.55
HMBS-222	ENST00000545621	SCN10A	Q9Y5Y9	1956 aa		18.46	■□□□□ 0.55
HMBS-222	ENST00000545621	IFNAR1	P17181	557 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	HOXA13	P31271	388 aa	Predicted RBP	18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	RBM25	P49756	843 aa	Known RBP	18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	WWC2	Q6AWC2	1192 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	IQSEC1	Q6DN90	963 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	KIF2C	Q99661	725 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	XPNPEP3	Q9NQH7	507 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	PDGFC	Q9NRA1	345 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	SYNRG	Q9UMZ2	1314 aa		18.45	■□□□□ 0.54
HMBS-222	ENST00000545621	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	PRPF3	O43395	683 aa	Known RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	CST5	P28325	142 aa	Predicted RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	ADCYAP1R1	P41586	468 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	PDE4D	Q08499	809 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	ANKRD1	Q15327	319 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	LRRC41	Q15345	812 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	PKN1	Q16512	942 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	PFKFB3	Q16875	520 aa	Predicted RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	TYW1B	Q6NUM6	668 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	PPP1R18	Q6NYC8	613 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	KLHDC9	Q8NEP7	349 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	LENG1	Q96BZ8	264 aa	Predicted RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	PDCD2L	Q9BRP1	358 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	RNF26	Q9BY78	433 aa	Predicted RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	BARHL2	Q9NY43	387 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	RBM27	Q9P2N5	1060 aa	Known RBP	18.44	■□□□□ 0.54
HMBS-222	ENST00000545621		Q9Y3F1	56 aa		18.44	■□□□□ 0.54
HMBS-222	ENST00000545621	CTAGE5	O15320	804 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	NR3C2	P08235	984 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	AK2	P54819	239 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	GJA9	P57773	515 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	CCT2	P78371	535 aa	Known RBP	18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	TNFAIP2	Q03169	654 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	ARHGEF16	Q5VV41	709 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	EEPD1	Q7L9B9	569 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.43	■□□□□ 0.54	2e-6	■■■■□ 20.3
HMBS-222	ENST00000545621	C11orf49	Q9H6J7	331 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	PSTPIP2	Q9H939	334 aa		18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	NCOA5	Q9HCD5	579 aa	Known RBP	18.43	■□□□□ 0.54
HMBS-222	ENST00000545621	STXBP3	O00186	592 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	PGK1	P00558	417 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	SCG2	P13521	617 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	SMPD1	P17405	629 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	EIF2AK2	P19525	551 aa	Known RBP	18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	PGM5	Q15124	567 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	STXBP2	Q15833	593 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	DUSP28	Q4G0W2	176 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	GJC2	Q5T442	439 aa	Predicted RBP	18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	USP17L6P	Q6QN14	398 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	HEATR3	Q7Z4Q2	680 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	VSIG10L	Q86VR7	867 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	LARP6	Q9BRS8	491 aa	Known RBP	18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	TSEN34	Q9BSV6	310 aa	Known RBP	18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	TPCN1	Q9ULQ1	816 aa		18.42	■□□□□ 0.54
HMBS-222	ENST00000545621	PFKFB2	O60825	505 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	NEK4	P51957	841 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	TMEM63B	Q5T3F8	832 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	CCDC62	Q6P9F0	684 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	RNF180	Q86T96	592 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	IL31RA	Q8NI17	732 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	SCFD2	Q8WU76	684 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	PHKB	Q93100	1093 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	HTATIP2	Q9BUP3	242 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	C22orf23	Q9BZE7	217 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	PHF24	Q9UPV7	400 aa		18.41	■□□□□ 0.54
HMBS-222	ENST00000545621	KAT6A	Q92794	2004 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	LTBP2	Q14767	1821 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	ESYT2	A0FGR8	921 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	KBTBD13	C9JR72	458 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	NKRF	O15226	690 aa	Known RBP eCLIP	18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	EIF3J	O75822	258 aa	Known RBP	18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	RGS20	O76081	388 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	SCRN1	Q12765	414 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	TLK2	Q86UE8	772 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	FCHSD1	Q86WN1	690 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	CUL5	Q93034	780 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	WDR11	Q9BZH6	1224 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	RIC8A	Q9NPQ8	531 aa		18.4	■□□□□ 0.54
HMBS-222	ENST00000545621	TRIP12	Q14669	1992 aa	Predicted RBP	18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	MYADML2	A6NDP7	307 aa		18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	CLK2	P49760	499 aa	Known RBP	18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	NAPA	P54920	295 aa		18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	IRX5	P78411	483 aa	Predicted RBP	18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	SNX17	Q15036	470 aa		18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	SMARCC2	Q8TAQ2	1214 aa		18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	ZMYND12	Q9H0C1	365 aa		18.39	■□□□□ 0.53
HMBS-222	ENST00000545621	MOXD2P	A6NHM9	499 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	STAM2	O75886	525 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	ARIH2	O95376	493 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	CCND2	P30279	289 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	MRPS9	P82933	396 aa	Known RBP	18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	STK3	Q13188	491 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	TTLL4	Q14679	1199 aa		18.38	■□□□□ 0.53
HMBS-222	ENST00000545621	ME3	Q16798	604 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms