RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 NKAIN3Q8N8D7 197 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 GOLM1Q8NBJ4 401 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 BBOF1Q8ND07 529 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 MAIP1Q8WWC4 291 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 RABGGTAQ92696 567 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 ZNF594Q96JF6 807 aaPredicted RBP5.65□□□□□ -1.5
UBE4A-203ENST00000545354 CEP19Q96LK0 163 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 CEP295NLQ96MC4 621 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 COG8Q96MW5 612 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 PRPF18Q99633 342 aaKnown RBP5.65□□□□□ -1.5
UBE4A-203ENST00000545354 TSG101Q99816 390 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 AIFM2Q9BRQ8 373 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 SELENOOQ9BVL4 669 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 FAM129AQ9BZQ8 928 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 SMARCAD1Q9H4L7 1026 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 AASDHPPTQ9NRN7 309 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 KLC4Q9NSK0 619 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 TBCCD1Q9NVR7 557 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 MBD2Q9UBB5 411 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 RASAL2Q9UJF2 1139 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 GGA2Q9UJY4 613 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 INTUQ9ULD6 942 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 GTF2A1LQ9UNN4 478 aa5.65□□□□□ -1.5
UBE4A-203ENST00000545354 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
UBE4A-203ENST00000545354 MRPS23Q9Y3D9 190 aaKnown RBP5.65□□□□□ -1.5
UBE4A-203ENST00000545354 ANKRD36BQ8N2N9 1353 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 KDM2BQ8NHM5 1336 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 GOLGA8CPA6NN73 597 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 BHMG1C9JSJ3 638 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 TLR3O15455 904 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 SRGAP3O43295 1099 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 KCNJ13O60928 360 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 TMCC2O75069 709 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 NPTXRO95502 500 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 ZKSCAN1P17029 563 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 CDC27P30260 824 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 ALDH3A1P30838 453 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 CTNNA1P35221 906 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 DDIT3P35638 169 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 ALDH18A1P54886 795 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 HSD17B7P56937 341 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 RELQ04864 619 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 PKN2Q16513 984 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 BCL2A1Q16548 175 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 Q3C1V9 767 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 CFAP100Q494V2 611 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 PABPC1LQ4VXU2 614 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 GRAMD4Q6IC98 578 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 GALNT17Q6IS24 598 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 LVRNQ6Q4G3 990 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 PI16Q6UXB8 463 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 RAPH1Q70E73 1250 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 TMC4Q7Z404 712 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 ZNF554Q86TJ5 538 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 IFNL3Q8IZI9 196 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 CPXCR1Q8N123 301 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 KLHDC4Q8TBB5 520 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 HNRNPABQ99729 332 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 NIFKQ9BYG3 293 aaKnown RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 NUF2Q9BZD4 464 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 STMN4Q9H169 189 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 NCOR1P1Q9H4R4 102 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 C8orf33Q9H7E9 229 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 VRTNQ9H8Y1 702 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 PPCSQ9HAB8 311 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 NDUFA13Q9P0J0 144 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 SUCLA2Q9P2R7 463 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 PRKAG2Q9UGJ0 569 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 GRID1Q9ULK0 1009 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 PNMA8BQ9ULN7 279 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-203ENST00000545354 VPS9D1Q9Y2B5 631 aa5.65□□□□□ -1.51
UBE4A-203ENST00000545354 ERICH3Q5RHP9 1530 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 BTBD11A6QL63 1104 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 CYP27B1O15528 508 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 RASA4O43374 803 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 EXTL3O43909 919 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 BUB1BO60566 1050 aaPredicted RBP5.64□□□□□ -1.51
UBE4A-203ENST00000545354 USO1O60763 962 aaKnown RBP5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ADAMTS4O75173 837 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 GUCY1B2O75343 617 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ITGB1P05556 798 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 GNAT1P11488 350 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ACADSBP45954 432 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 CD97P48960 835 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ST5P78524 1137 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 PSMD6Q15008 389 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 TMEM53Q6P2H8 277 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 CWC27Q6UX04 472 aaKnown RBP5.64□□□□□ -1.51
UBE4A-203ENST00000545354 CABP7Q86V35 215 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 IFNL2Q8IZJ0 200 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ITPKCQ96DU7 683 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 TRAPPC9Q96Q05 1148 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ALPK1Q96QP1 1244 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 MPHOSPH9Q99550 1183 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 CENPOQ9BU64 300 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 APOL5Q9BWW9 433 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 AP1M1Q9BXS5 423 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 MIS12Q9H081 205 aa5.64□□□□□ -1.51
UBE4A-203ENST00000545354 ZNF700Q9H0M5 742 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms