RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 EP400NLQ6ZTU2 488 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 FAM126BQ8IXS8 530 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 CRIPAKQ8N1N5 446 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 STAG2Q8N3U4 1231 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 TTLL11Q8NHH1 800 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 CYP2W1Q8TAV3 490 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 SAP130Q9H0E3 1048 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 CWC22Q9HCG8 908 aaKnown RBP8.43□□□□□ -1.06
LDHA-223ENST00000545215 SCHIP1Q9P0W5 487 aaPredicted RBP8.43□□□□□ -1.06
LDHA-223ENST00000545215 ELP1O95163 1332 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 UMODL1Q5DID0 1318 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 TLR3O15455 904 aaKnown RBP8.42□□□□□ -1.06
LDHA-223ENST00000545215 CD4P01730 458 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 GGCXP38435 758 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 CCL23P55773 120 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 ERVK-21P61565 698 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 TCP10Q12799 353 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 GRB14Q14449 540 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 WDR43Q15061 677 aaKnown RBP eCLIP8.42□□□□□ -1.065e-7■□□□□ 10.4
LDHA-223ENST00000545215 GRIK5Q16478 980 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 TMC7Q7Z402 723 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 CYP2U1Q7Z449 544 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 MRPL38Q96DV4 380 aaKnown RBP8.42□□□□□ -1.06
LDHA-223ENST00000545215 HIPK3Q9H422 1215 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 GREM2Q9H772 168 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 ANKFY1Q9P2R3 1169 aa8.42□□□□□ -1.06
LDHA-223ENST00000545215 PRR5-ARHGAP8B1AHC4 643 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 ARVCFO00192 962 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 SIAH2O43255 324 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 RECKO95980 971 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 IGHMBP2P38935 993 aaKnown RBP8.41□□□□□ -1.06
LDHA-223ENST00000545215 CTSWP56202 376 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 ARHGAP8P85298 464 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 SHC2P98077 582 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 CHRNDQ07001 517 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 SOWAHCQ53LP3 525 aaPredicted RBP8.41□□□□□ -1.06
LDHA-223ENST00000545215 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 CCDC116Q8IYX3 515 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
LDHA-223ENST00000545215 CLDND1Q9NY35 253 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 CTNNA3Q9UI47 895 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 LRRFIP2Q9Y608 721 aaKnown RBP8.41□□□□□ -1.06
LDHA-223ENST00000545215 A0A1B0GUL6 1792 aa8.41□□□□□ -1.06
LDHA-223ENST00000545215 LCHNA4D1U4 455 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 TNFRSF10BO14763 440 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 NCK2O43639 380 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 ADAMTS4O75173 837 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 KRT38O76015 456 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 ADH1CP00326 375 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 P4HBP07237 508 aaKnown RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 PFKMP08237 780 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 ICAM3P32942 547 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 SMAD4Q13485 552 aaKnown RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 ANGPT1Q15389 498 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 PPP1R26Q5T8A7 1209 aaPredicted RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 CCSAPQ6IQ19 270 aaPredicted RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 ZGPATQ8N5A5 531 aaKnown RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 KDF1Q8NAX2 398 aaPredicted RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 JARID2Q92833 1246 aaPredicted RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 TGS1Q96RS0 853 aaKnown RBP8.4□□□□□ -1.06
LDHA-223ENST00000545215 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 WNT8AQ9H1J5 351 aa8.4□□□□□ -1.06
LDHA-223ENST00000545215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.4□□□□□ -1.061e-9■■■□□ 16.9
LDHA-223ENST00000545215 RFX7Q2KHR2 1363 aa8.4□□□□□ -1.07
LDHA-223ENST00000545215 DOCK1Q14185 1865 aa8.4□□□□□ -1.07
LDHA-223ENST00000545215 RALGAPA2Q2PPJ7 1873 aa8.4□□□□□ -1.07
LDHA-223ENST00000545215 A6NJY4 79 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 TREHO43280 583 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 NDUFB5O43674 189 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 TAF5LO75529 589 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 CD2BP2O95400 341 aaKnown RBP8.39□□□□□ -1.07
LDHA-223ENST00000545215 ADD1P35611 737 aaKnown RBP8.39□□□□□ -1.07
LDHA-223ENST00000545215 SMTNP53814 917 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 CCNA1P78396 465 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 NR5A1Q13285 461 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 CLUL1Q15846 466 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 KCNA10Q16322 511 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 PTPN21Q16825 1174 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 TIGD5Q53EQ6 642 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 TCEAL5Q5H9L2 206 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 COX20Q5RI15 118 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 DPP9Q86TI2 863 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
LDHA-223ENST00000545215 KLHDC9Q8NEP7 349 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 GLT1D1Q96MS3 346 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 MTUS1Q9ULD2 1270 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 OTOGLQ3ZCN5 2332 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 SMCHD1A6NHR9 2005 aa8.39□□□□□ -1.07
LDHA-223ENST00000545215 A0A0U1RQG5 324 aaPredicted RBP8.38□□□□□ -1.07
LDHA-223ENST00000545215 ACTN1P12814 892 aa8.38□□□□□ -1.07
LDHA-223ENST00000545215 PMLP29590 882 aa8.38□□□□□ -1.07
LDHA-223ENST00000545215 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
LDHA-223ENST00000545215 CLCN5P51795 746 aa8.38□□□□□ -1.07
LDHA-223ENST00000545215 DLX2Q07687 328 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms