RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 KLRC3Q07444 240 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 NR5A1Q13285 461 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 SLC35G1Q2M3R5 365 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 RILPL1Q5EBL4 403 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 WWC2Q6AWC2 1192 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 GALNT17Q6IS24 598 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 KCTD1Q719H9 257 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 ARMC9Q7Z3E5 817 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
MDH1-216ENST00000544381 BICD2Q8TD16 824 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 KCNG4Q8TDN1 519 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 PIGSQ96S52 555 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 SLC6A16Q9GZN6 736 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 BARHL2Q9NY43 387 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 NOL7Q9UMY1 257 aaKnown RBP11.49□□□□□ -0.57
MDH1-216ENST00000544381 SLC27A5Q9Y2P5 690 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 PTPN22Q9Y2R2 807 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 PPP2R3BQ9Y5P8 575 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 STXBP3O00186 592 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 SPTLC2O15270 562 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 NDUFB10O96000 172 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 NF2P35240 595 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 NAPAP54920 295 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 CRHR2Q13324 411 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
MDH1-216ENST00000544381 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 ADGRF4Q8IZF3 695 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 BLIDQ8IZY5 108 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 LINC00301Q8NCQ3 95 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 CD99L2Q8TCZ2 262 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 SHISA4Q96DD7 197 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 C6orf50Q9HD87 102 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 PCDHA4Q9UN74 947 aa11.48□□□□□ -0.57
MDH1-216ENST00000544381 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 MANSC4A6NHS7 340 aaPredicted RBP11.47□□□□□ -0.57
MDH1-216ENST00000544381 PHF20L1A8MW92 1017 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 CTNND1O60716 968 aaKnown RBP11.47□□□□□ -0.57
MDH1-216ENST00000544381 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 ZBTB48P10074 688 aaPredicted RBP11.47□□□□□ -0.57
MDH1-216ENST00000544381 BMP3P12645 472 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 GNA11P29992 359 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 SLC16A2P36021 539 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 IKQ13123 557 aaPredicted RBP11.47□□□□□ -0.57
MDH1-216ENST00000544381 SLC39A14Q15043 492 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 JMJD4Q9H9V9 463 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 CEP131Q9UPN4 1083 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 TMX2Q9Y320 296 aa11.47□□□□□ -0.57
MDH1-216ENST00000544381 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 CCDC194A0A1B0GVG4 234 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 A0A1W2PRG0 241 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 USP17L10C9JJH3 530 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 ZBTB5O15062 677 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 USP2O75604 605 aaPredicted RBP11.46□□□□□ -0.57
MDH1-216ENST00000544381 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.57
MDH1-216ENST00000544381 ATP2B1P20020 1258 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 NPY5RQ15761 445 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 ZSCAN23Q3MJ62 389 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 SUPT20HL1Q3ZLR7 823 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 CCDC183Q5T5S1 534 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 CCAR1Q8IX12 1150 aaKnown RBP11.46□□□□□ -0.57
MDH1-216ENST00000544381 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 ACER1Q8TDN7 264 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
MDH1-216ENST00000544381 FEZ1Q99689 392 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.57
MDH1-216ENST00000544381 A0A0C4DFX4 3053 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 TMEM232C9JQI7 657 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 PPP6R2O75170 966 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 BMP15O95972 392 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 TOB1P50616 345 aaPredicted RBP11.45□□□□□ -0.58
MDH1-216ENST00000544381 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 ADALQ6DHV7 355 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 CCDC73Q6ZRK6 1079 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 TNFRSF25Q93038 417 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 THAP11Q96EK4 314 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 SLC10A4Q96EP9 437 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 VCPKMTQ9H867 229 aa11.45□□□□□ -0.58
MDH1-216ENST00000544381 A0A1W2PQ27 194 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 A0A1W2PQ64 194 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 A0A1W2PQD8 194 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 LIG1P18858 919 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 MARCKSP29966 332 aaPredicted RBP11.44□□□□□ -0.58
MDH1-216ENST00000544381 SLC19A1P41440 591 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 ADCY7P51828 1080 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 INHBEP58166 350 aa11.44□□□□□ -0.58
MDH1-216ENST00000544381 PTPAQ15257 358 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms