RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 RMDN2Q96LZ7 410 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 LRRN2O75325 713 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 POLR2MP0CAP2 368 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 MAPK4P31152 587 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 IFNL3Q8IZI9 196 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 FANCBQ8NB91 859 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 SEPT8Q92599 483 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 MAP3K19Q56UN5 1328 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 UBAP1LF5GYI3 381 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 POLGP54098 1239 aaPredicted RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 CDC26Q8NHZ8 85 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 CEP19Q96LK0 163 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 METTL14Q9HCE5 456 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 HIPK4Q8NE63 616 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 DRC3Q9H069 523 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 PSDA5PKW4 1024 aaPredicted RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 MYO1FO00160 1098 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 RYBPQ8N488 228 aaPredicted RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 MAML1Q92585 1016 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 TEKT3Q9BXF9 490 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 SOWAHDA6NJG2 315 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 PFKFB2O60825 505 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 UBXN2AP68543 259 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 GTF2IP78347 998 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 GAS2L3Q86XJ1 694 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 DNAJC17Q9NVM6 304 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 NOVA2Q9UNW9 492 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 KIAA1024Q9UPX6 916 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 BASP1P80723 227 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 DHX9Q08211 1270 aaKnown RBP16.78■□□□□ 0.28
CHD4-210ENST00000544040 GNPTABQ3T906 1256 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 FAM26FQ5R3K3 315 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
CHD4-210ENST00000544040 PALM3A6NDB9 673 aaPredicted RBP16.77■□□□□ 0.28
CHD4-210ENST00000544040 ART3Q13508 389 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 IP6K1Q92551 441 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 GOLGA8SH3BPF8 625 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 SCG2P13521 617 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
CHD4-210ENST00000544040 MFAP3P55082 362 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 TNKSO95271 1327 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 ZBTB24O43167 697 aaPredicted RBP16.77■□□□□ 0.28
CHD4-210ENST00000544040 CSPG5O95196 566 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 PTK2Q05397 1052 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 SCRN1Q12765 414 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
CHD4-210ENST00000544040 KRT1P04264 644 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 DNAAF3Q8N9W5 541 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 SPATA17Q96L03 361 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 KIF9Q9HAQ2 790 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 KLRF2D3W0D1 207 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 GUCY2CP25092 1073 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 HDLBPQ00341 1268 aaKnown RBP16.77■□□□□ 0.27
CHD4-210ENST00000544040 LRRC23Q53EV4 343 aaPredicted RBP16.77■□□□□ 0.27
CHD4-210ENST00000544040 C11orf57Q6ZUT1 292 aaPredicted RBP16.77■□□□□ 0.27
CHD4-210ENST00000544040 RUNDC3BQ96NL0 473 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 ADPGKQ9BRR6 497 aa16.77■□□□□ 0.27
CHD4-210ENST00000544040 ECEL1O95672 775 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 MRPS25P82663 173 aaKnown RBP16.76■□□□□ 0.27
CHD4-210ENST00000544040 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 ZFYVE9O95405 1425 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 TCP10L2B9ZVM9 353 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 ATP5JP18859 108 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 ARHGEF18Q6ZSZ5 1173 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 PCIF1Q9H4Z3 704 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 PLS3P13797 630 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 FAM193BQ96PV7 902 aaPredicted RBP16.76■□□□□ 0.27
CHD4-210ENST00000544040 AP1M1Q9BXS5 423 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 UBN1Q9NPG3 1134 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 CLIC2O15247 247 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 MT-ND3P03897 115 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 SCNN1DP51172 638 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 GYS2P54840 703 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 PPP4R4Q6NUP7 873 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 SPOPLQ6IQ16 392 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CHD4-210ENST00000544040 GOLGA8QA0A0J9YX86 632 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 GOLGA8OA6NCC3 632 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 ANKRD65E5RJM6 399 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 GOLGA8NF8WBI6 632 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 GNL1P36915 607 aaPredicted RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 GYG1P46976 350 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 DLGAP5Q15398 846 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 MAP7D3Q8IWC1 876 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 ANKRD35Q8N283 1001 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 SCINQ9Y6U3 715 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 GOLGA8CPA6NN73 597 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 CEP70Q8NHQ1 597 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 FANCAO15360 1455 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms