RNA–Protein interactions for RNA: ENST00000543754.1

PUS1-209, Transcript of pseudouridylate synthase 1, humanhuman

TSL 2

Gene PUS1, Length 1,378 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1-209ENST00000543754 CALML3P27482 149 aa12.92□□□□□ -0.34
PUS1-209ENST00000543754 HAND2P61296 217 aa12.92□□□□□ -0.34
PUS1-209ENST00000543754 NMIQ13287 307 aaPredicted RBP12.92□□□□□ -0.34
PUS1-209ENST00000543754 RRP12Q5JTH9 1297 aaKnown RBP12.92□□□□□ -0.34
PUS1-209ENST00000543754 TBC1D10CQ8IV04 446 aa12.92□□□□□ -0.34
PUS1-209ENST00000543754 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
PUS1-209ENST00000543754 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 ZEB2O60315 1214 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 CA3P07451 260 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
PUS1-209ENST00000543754 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
PUS1-209ENST00000543754 BMP1P13497 986 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
PUS1-209ENST00000543754 NT5C2P49902 561 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 KCNQ1P51787 676 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
PUS1-209ENST00000543754 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 PPP2R2DQ66LE6 453 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 TMCO2Q7Z6W1 182 aaPredicted RBP12.91□□□□□ -0.34
PUS1-209ENST00000543754 OR6J1Q8NGC5 347 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
PUS1-209ENST00000543754 GOLGA8HP0CJ92 632 aa12.9□□□□□ -0.34
PUS1-209ENST00000543754 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
PUS1-209ENST00000543754 PDE4AP27815 886 aa12.9□□□□□ -0.34
PUS1-209ENST00000543754 MRPS5P82675 430 aaKnown RBP12.9□□□□□ -0.34
PUS1-209ENST00000543754 MICALL1Q8N3F8 863 aa12.9□□□□□ -0.34
PUS1-209ENST00000543754 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
PUS1-209ENST00000543754 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
PUS1-209ENST00000543754 UBA5Q9GZZ9 404 aa12.9□□□□□ -0.34
PUS1-209ENST00000543754 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.34
PUS1-209ENST00000543754 COL4A4P53420 1690 aaPredicted RBP12.9□□□□□ -0.35
PUS1-209ENST00000543754 NEDD4P46934 1319 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 A6NJR5 290 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 IQCF3P0C7M6 154 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 CCDC62Q6P9F0 684 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 RNF207Q6ZRF8 634 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
PUS1-209ENST00000543754 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
PUS1-209ENST00000543754 KAT2BQ92831 832 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 MTG1Q9BT17 334 aaPredicted RBP12.89□□□□□ -0.35
PUS1-209ENST00000543754 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
PUS1-209ENST00000543754 LCHNA4D1U4 455 aa12.88□□□□□ -0.35
PUS1-209ENST00000543754 LPXNO60711 386 aa12.88□□□□□ -0.35
PUS1-209ENST00000543754 TAP1Q03518 808 aa12.88□□□□□ -0.35
PUS1-209ENST00000543754 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
PUS1-209ENST00000543754 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
PUS1-209ENST00000543754 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
PUS1-209ENST00000543754 MTIF3Q9H2K0 278 aaKnown RBP12.88□□□□□ -0.35
PUS1-209ENST00000543754 ADD3Q9UEY8 706 aaKnown RBP12.88□□□□□ -0.35
PUS1-209ENST00000543754 RAD50Q92878 1312 aa12.88□□□□□ -0.35
PUS1-209ENST00000543754 KIAA1217Q5T5P2 1943 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 POU3F3P20264 500 aaPredicted RBP12.87□□□□□ -0.35
PUS1-209ENST00000543754 CPT1AP50416 773 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 HIC1Q14526 733 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 USH1GQ495M9 461 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 GDF6Q6KF10 455 aaPredicted RBP12.87□□□□□ -0.35
PUS1-209ENST00000543754 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
PUS1-209ENST00000543754 WNT8BQ93098 351 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
PUS1-209ENST00000543754 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
PUS1-209ENST00000543754 LOC102724159A0A0B4J2E5 919 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
PUS1-209ENST00000543754 GSPT1P15170 499 aaKnown RBP12.86□□□□□ -0.35
PUS1-209ENST00000543754 ARHGAP1Q07960 439 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 PDE4DQ08499 809 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 PWP2Q15269 919 aaKnown RBP12.86□□□□□ -0.35
PUS1-209ENST00000543754 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 TRAF7Q6Q0C0 670 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 HERC6Q8IVU3 1022 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 AFG1LQ8WV93 481 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 CTNNA3Q9UI47 895 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 LAMA4Q16363 1823 aa12.86□□□□□ -0.35
PUS1-209ENST00000543754 OPLAHO14841 1288 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 PFKMP08237 780 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 MMP3P08254 477 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 DEFB103AP81534 67 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 GRB10Q13322 594 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 MFSD6Q6ZSS7 791 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
PUS1-209ENST00000543754 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 ARNTL2Q8WYA1 636 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
PUS1-209ENST00000543754 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
PUS1-209ENST00000543754 ZNF213O14771 459 aa12.84□□□□□ -0.35
PUS1-209ENST00000543754 NKRFO15226 690 aaKnown RBP eCLIP12.84□□□□□ -0.35
PUS1-209ENST00000543754 NBNO60934 754 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms