RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 NDUFA10O95299 355 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 RPSAP08865 295 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 CLNS1AP54105 237 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 NSMFQ6X4W1 530 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 NEK8Q86SG6 692 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 DHX40Q8IX18 779 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 KCNB2Q92953 911 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 THRAP3Q9Y2W1 955 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 USP54Q70EL1 1684 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 SLCO1A2P46721 670 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 GRIN1Q05586 938 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 FAM26FQ5R3K3 315 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 DPP8Q6V1X1 898 aaPredicted RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 PHLDB2Q86SQ0 1253 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 GOLGA5Q8TBA6 731 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 FOXP1Q9H334 677 aaPredicted RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 CLIC2O15247 247 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 HEXIM1O94992 359 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 XRCC5P13010 732 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 PRKG1Q13976 671 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 INTS8Q75QN2 995 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 FAM84BQ96KN1 310 aaPredicted RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 IMPG2Q9BZV3 1241 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 ADAMTS1Q9UHI8 967 aa14.24□□□□□ -0.13
TUBGCP2-210ENST00000543663 LRRN2O75325 713 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 APBA3O96018 575 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 EIF4A3P38919 411 aaKnown RBP14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 NFIXQ14938 502 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 WDR66Q8TBY9 1149 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 PTPN22Q9Y2R2 807 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 CSF1RP07333 972 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 RUFY4Q6ZNE9 571 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 TXNRD3Q86VQ6 643 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 PPP2R5DQ14738 602 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 IQCB1Q15051 598 aa14.23□□□□□ -0.13
TUBGCP2-210ENST00000543663 ATP2A1O14983 1001 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 KRT15P19012 456 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 STAT1P42224 750 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 LINC00116Q8NCU8 138 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 FAM71BQ8TC56 605 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 DNAJC17Q9NVM6 304 aaKnown RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PHLPP2Q6ZVD8 1323 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PCK1P35558 622 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 ZNF131P52739 623 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PPP2R5BQ15173 497 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 ZKSCAN8Q15776 578 aaPredicted RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 CC2D1AQ6P1N0 951 aaPredicted RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PPP1R21Q6ZMI0 780 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 ENAHQ8N8S7 591 aaPredicted RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 FNBP1Q96RU3 617 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PSTPIP2Q9H939 334 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 QTRT2Q9H974 415 aaKnown RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PANK4Q9NVE7 773 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 SERPINB2P05120 415 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 SETDB1Q15047 1291 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 HAUS3Q68CZ6 603 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 TBCKQ8TEA7 893 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 SH3RF3Q8TEJ3 882 aaPredicted RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 AP1M1Q9BXS5 423 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 RGS16O15492 202 aaPredicted RBP14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 SNAP25P60880 206 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 PDCLQ13371 301 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 ZNF710Q8N1W2 664 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 MICAL1Q8TDZ2 1067 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 KIFC2Q96AC6 838 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 SUGCTQ9HAC7 445 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
TUBGCP2-210ENST00000543663 TCP1P17987 556 aaKnown RBP14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 EVX2Q03828 476 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 SARM1Q6SZW1 724 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 KCTD1Q719H9 257 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 KRT26Q7Z3Y9 468 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 ARHGEF2Q92974 986 aaKnown RBP14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 TFR2Q9UP52 801 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 ATP8A1Q9Y2Q0 1164 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 MED1Q15648 1581 aaPredicted RBP14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 MYO1CO00159 1063 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 PLCG1P19174 1290 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 VWA3BQ502W6 1294 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 RIN2Q8WYP3 895 aaPredicted RBP14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 HPS3Q969F9 1004 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
TUBGCP2-210ENST00000543663 PIGSQ96S52 555 aa14.21□□□□□ -0.14
TUBGCP2-210ENST00000543663 MXD3Q9BW11 206 aa14.21□□□□□ -0.14
TUBGCP2-210ENST00000543663 AMFRQ9UKV5 643 aa14.21□□□□□ -0.14
TUBGCP2-210ENST00000543663 SCAF8Q9UPN6 1271 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms