RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 IL17RBQ9NRM6 502 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 SLX4Q8IY92 1834 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 PSMD2Q13200 908 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 PRR16Q569H4 304 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 NCAPH2Q6IBW4 605 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 HS2ST1Q7LGA3 356 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 DHX58Q96C10 678 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 GPRASP2Q96D09 838 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 AP5M1Q9H0R1 490 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 MLXIPQ9HAP2 919 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 ZNHIT6Q9NWK9 470 aaKnown RBP8.94□□□□□ -0.98
TRIM59-208ENST00000543469 MYH2Q9UKX2 1941 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 PTPREP23469 700 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 FSTL1Q12841 308 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 PTGDRQ13258 359 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 MFSD14CQ5VZR4 134 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 HOMER2Q9NSB8 354 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 ARHGAP4P98171 946 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 ODR4Q5SWX8 454 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 FAM200AQ8TCP9 573 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 RIT2Q99578 217 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 INCENPQ9NQS7 918 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 LMBRD1Q9NUN5 540 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF215Q9UL58 517 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 DOCK2Q92608 1830 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 SERPINC1P01008 464 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 CHGBP05060 677 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 VCAM1P19320 739 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 TAF1CQ15572 869 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 NTRK3Q16288 839 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 SH3D19Q5HYK7 790 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 NBPF3Q9H094 633 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 NKRFO15226 690 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 CALUO43852 315 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF202O95125 648 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 GNA14O95837 355 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 MAP3K10Q02779 954 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 TTLL4Q14679 1199 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 STAG2Q8N3U4 1231 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 OPTNQ96CV9 577 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 SCLT1Q96NL6 688 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 RMDN3Q96TC7 470 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 RAVER2Q9HCJ3 691 aaKnown RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 TUFT1Q9NNX1 390 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 KCND2Q9NZV8 630 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 PIK3CDO00329 1044 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 STX10O60499 249 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 IDEP14735 1019 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 ATP2C1P98194 919 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF397Q8NF99 534 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 TRIM5Q9C035 493 aa8.93□□□□□ -0.98
TRIM59-208ENST00000543469 RNF216Q9NWF9 866 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-208ENST00000543469 TESPA1A2RU30 521 aaPredicted RBP8.92□□□□□ -0.98
TRIM59-208ENST00000543469 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
TRIM59-208ENST00000543469 CDC42EP1Q00587 391 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 CATSPERGQ6ZRH7 1159 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 PPFIBP1Q86W92 1011 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 CMTR1Q8N1G2 835 aaKnown RBP8.92□□□□□ -0.98
TRIM59-208ENST00000543469 GSDMAQ96QA5 445 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 COL4A3BPQ9Y5P4 624 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 MRVI1Q9Y6F6 885 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 ANKRD31Q8N7Z5 1873 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 WDR64B1ANS9 1081 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 CCDC172P0C7W6 258 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 PRELPP51888 382 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF445P59923 1031 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 TFDP1Q14186 410 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 ZSCAN23Q3MJ62 389 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 SOCS4Q8WXH5 440 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 PCDHA7Q9UN72 937 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 FCGRTP55899 365 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 NLRP12P59046 1061 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 POSTNQ15063 836 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 CREBRFQ8IUR6 639 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 SMAP1Q8IYB5 467 aaPredicted RBP8.92□□□□□ -0.98
TRIM59-208ENST00000543469 SYCP3Q8IZU3 236 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF384Q8TF68 577 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 KRT13P13646 458 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 TMOD1P28289 359 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 INPP5BP32019 993 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 KRBA2Q6ZNG9 492 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 RIOX2Q8IUF8 465 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF526Q8TF50 670 aaPredicted RBP8.92□□□□□ -0.98
TRIM59-208ENST00000543469 WNK4Q96J92 1243 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 PCDHB13Q9Y5F0 798 aa8.92□□□□□ -0.98
TRIM59-208ENST00000543469 hCG_1642624A0A1W2PR95 340 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 SYCE3A1L190 88 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 ADM5C9JUS6 153 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 PFKFB1P16118 471 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 GSDMDP57764 484 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 PPP2R3AQ06190 1150 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 NOGQ13253 232 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 VGLL4Q14135 290 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 EPHA7Q15375 998 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 RESP18Q5W5W9 173 aa8.91□□□□□ -0.98
TRIM59-208ENST00000543469 RGMBQ6NW40 437 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms