RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 MAEAQ7L5Y9 396 aa12.47□□□□□ -0.41
CDH4-201ENST00000543233 YTHDF3Q7Z739 585 aaKnown RBP12.47□□□□□ -0.41
CDH4-201ENST00000543233 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
CDH4-201ENST00000543233 TEKT4Q8WW24 435 aa12.47□□□□□ -0.41
CDH4-201ENST00000543233 CCT8L2Q96SF2 557 aa12.47□□□□□ -0.41
CDH4-201ENST00000543233 TSPAN18Q96SJ8 248 aa12.47□□□□□ -0.41
CDH4-201ENST00000543233 MYH14Q7Z406 1995 aaKnown RBP12.47□□□□□ -0.41
CDH4-201ENST00000543233 TAF1P21675 1872 aa12.47□□□□□ -0.41
CDH4-201ENST00000543233 B4DLN1 442 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 GCLCP48506 637 aaPredicted RBP12.46□□□□□ -0.41
CDH4-201ENST00000543233 APBA1Q02410 837 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 USP49Q70CQ1 688 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 SGMS1Q86VZ5 419 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 NLRP14Q86W24 1093 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 TMEM139Q8IV31 216 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 NOSTRINQ8IVI9 506 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 MAGEC3Q8TD91 643 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 ESR2Q92731 530 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 MMTAG2Q9BU76 263 aaKnown RBP12.46□□□□□ -0.41
CDH4-201ENST00000543233 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 LRRD1A4D1F6 860 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 CREB3O43889 395 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 CMA1P23946 247 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 LIFRP42702 1097 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 ALX1Q15699 326 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 PPP1R15BQ5SWA1 713 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.41
CDH4-201ENST00000543233 ZNF384Q8TF68 577 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 EPN3Q9H201 632 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 PIDD1Q9HB75 910 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 ZFATQ9P243 1243 aa12.46□□□□□ -0.41
CDH4-201ENST00000543233 PHLPP1O60346 1717 aa12.46□□□□□ -0.42
CDH4-201ENST00000543233 COL4A1P02462 1669 aa12.46□□□□□ -0.42
CDH4-201ENST00000543233 DNM1LO00429 736 aa12.46□□□□□ -0.42
CDH4-201ENST00000543233 GNAT2P19087 354 aa12.46□□□□□ -0.42
CDH4-201ENST00000543233 ZNF570Q96NI8 536 aa12.46□□□□□ -0.42
CDH4-201ENST00000543233 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.42
CDH4-201ENST00000543233 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.42
CDH4-201ENST00000543233 KCNH3Q9ULD8 1083 aa12.46□□□□□ -0.42
CDH4-201ENST00000543233 POLR2DO15514 142 aaKnown RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 HSF2BPO75031 334 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 IFNAR1P17181 557 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 CASP1P29466 404 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 CNGA1P29973 690 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 KIF5BP33176 963 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 CD151P48509 253 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 MECOMQ03112 1051 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 MPP3Q13368 585 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 ENAHQ8N8S7 591 aaPredicted RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 MYCBPAPQ8TBZ2 947 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 STAMQ92783 540 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 NOP53Q9NZM5 478 aaKnown RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 BACH1O14867 736 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 HPDP32754 393 aaPredicted RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 USP14P54578 494 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 SETDB1Q15047 1291 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 PTPAQ15257 358 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 CRACR2BQ8N4Y2 399 aaPredicted RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 SH3GL2Q99962 352 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 USP21Q9UK80 565 aa12.45□□□□□ -0.42
CDH4-201ENST00000543233 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
CDH4-201ENST00000543233 ENC1O14682 589 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 TRMT44Q8IYL2 757 aaKnown RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 MIPOL1Q8TD10 442 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 WDR19Q8NEZ3 1342 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 ZC3H4Q9UPT8 1303 aaKnown RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 MMP1P03956 469 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 AFMP43652 599 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 SCTRP47872 440 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 NCAPHQ15003 741 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 PCDHA5Q9Y5H7 936 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 COBLO75128 1261 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 CA8P35219 290 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 NLRP12P59046 1061 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 NNTQ13423 1086 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 DRP2Q13474 957 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 UBE4AQ14139 1066 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 EARS2Q5JPH6 523 aaKnown RBP12.44□□□□□ -0.42
CDH4-201ENST00000543233 KLHL10Q6JEL2 608 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 MAP3K14Q99558 947 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 RHBDL2Q9NX52 303 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 C2CD2Q9Y426 696 aa12.44□□□□□ -0.42
CDH4-201ENST00000543233 ATRNO75882 1429 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms