RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SERPINI2O75830 405 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 EP400NLQ6ZTU2 488 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 DHX9Q08211 1270 aaKnown RBP20.97■□□□□ 0.95
HDAC4-215ENST00000543185 ICA1LQ8NDH6 482 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 DHX38Q92620 1227 aaKnown RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 MTBPQ96DY7 904 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 KIAA0232Q92628 1395 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 ATP8A1Q9Y2Q0 1164 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 EDC4Q6P2E9 1401 aaKnown RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 APOA1P02647 267 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 RARS2Q5T160 578 aaKnown RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 BUB1O43683 1085 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 PFKFB2O60825 505 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 CASP8Q14790 479 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 IQCB1Q15051 598 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 NUDCD3Q8IVD9 361 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 TRMT44Q8IYL2 757 aaKnown RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 ENAHQ8N8S7 591 aaPredicted RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 EPB41L5Q9HCM4 733 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 YARSP54577 528 aaKnown RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 PTK2Q05397 1052 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 E2F5Q15329 346 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 METTL22Q9BUU2 404 aaPredicted RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 MRPL47Q9HD33 250 aaKnown RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 PNMA6AP0CW24 399 aaPredicted RBP20.96■□□□□ 0.95
HDAC4-215ENST00000543185 FAM186BQ8IYM0 893 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 PHKBQ93100 1093 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 SBNO1A3KN83 1393 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 SPARCL1Q14515 664 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 NBPF3Q9H094 633 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 ATP8A2Q9NTI2 1148 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 TBC1D7Q9P0N9 293 aa20.96■□□□□ 0.95
HDAC4-215ENST00000543185 FAM178BQ8IXR5 827 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 RASSF10A6NK89 507 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 IGBP1P78318 339 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 TMEM247A6NEH6 219 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 ZNF189O75820 626 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-215ENST00000543185 KRT19P08727 400 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 GRAMD1BQ3KR37 738 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 CCDC159P0C7I6 412 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 ARHGAP44Q17R89 818 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 MAML1Q92585 1016 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 MYO1CO00159 1063 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 DDAH1O94760 285 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 MAGOHBQ96A72 148 aaKnown RBP20.95■□□□□ 0.94
HDAC4-215ENST00000543185 FGD4Q96M96 766 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 GPCPD1Q9NPB8 672 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 DENND4BO75064 1496 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-215ENST00000543185 GYG2O15488 501 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 IFNA8P32881 189 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 BIRC2Q13490 618 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 CROCC2H7BZ55 1655 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 CASP2P42575 452 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 IFNAR2P48551 515 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 COPB1P53618 953 aaKnown RBP20.95■□□□□ 0.94
HDAC4-215ENST00000543185 RWDD2BP57060 319 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 TBC1D22AQ8WUA7 517 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 TUBGCP2Q9BSJ2 902 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 BATF3Q9NR55 127 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 KRT82Q9NSB4 513 aa20.95■□□□□ 0.94
HDAC4-215ENST00000543185 HESX1Q9UBX0 185 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 CLCN6P51797 869 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 MKRN3Q13064 507 aaKnown RBP20.94■□□□□ 0.94
HDAC4-215ENST00000543185 BBS5Q8N3I7 341 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 FBXO18Q8NFZ0 1043 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 OR9Q1Q8NGQ5 310 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 FANCLQ9NW38 375 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 ZNF233A6NK53 670 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 MFAP3P55082 362 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 DR1Q01658 176 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 CAPRIN2Q6IMN6 1127 aaKnown RBP20.94■□□□□ 0.94
HDAC4-215ENST00000543185 CCDC188H7C350 402 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 PPP6R2O75170 966 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 OR52Z1P0C646 297 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 E7EWF7 191 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 DPH5Q9H2P9 285 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 RASSF7Q02833 373 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 FLOT2Q14254 428 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 DZIP3Q86Y13 1208 aaKnown RBP20.94■□□□□ 0.94
HDAC4-215ENST00000543185 PLBD2Q8NHP8 589 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 JDP2Q8WYK2 163 aa20.94■□□□□ 0.94
HDAC4-215ENST00000543185 GPHNQ9NQX3 736 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-215ENST00000543185 PCGF5Q86SE9 256 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 FOXP1Q9H334 677 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-215ENST00000543185 RWDD2AQ9UIY3 292 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 ME3Q16798 604 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 ZBTB8OSQ8IWT0 167 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
HDAC4-215ENST00000543185 TRIM55Q9BYV6 548 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 POC1B-GALNT4F8VUJ3 575 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 BZW1Q7L1Q6 419 aaKnown RBP20.93■□□□□ 0.94
HDAC4-215ENST00000543185 ST7Q9NRC1 585 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 REREQ9P2R6 1566 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 ZBTB24O43167 697 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-215ENST00000543185 GAP43P17677 238 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 ANLNQ9NQW6 1124 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 BLIDQ8IZY5 108 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 ENOX1Q8TC92 643 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms