RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 CPLX1O14810 134 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 PRPF3O43395 683 aaKnown RBP17.79■□□□□ 0.44
LINC01089-209ENST00000542933 SCG2P13521 617 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 NAPAP54920 295 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
LINC01089-209ENST00000542933 STK3Q13188 491 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 PFKFB3Q16875 520 aaPredicted RBP17.79■□□□□ 0.44
LINC01089-209ENST00000542933 ANO1Q5XXA6 986 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 CPLX2Q6PUV4 134 aaKnown RBP17.79■□□□□ 0.44
LINC01089-209ENST00000542933 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 TEX2Q8IWB9 1127 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 PHKBQ93100 1093 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 SLKQ9H2G2 1235 aaPredicted RBP17.79■□□□□ 0.44
LINC01089-209ENST00000542933 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 XPNPEP3Q9NQH7 507 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
LINC01089-209ENST00000542933 STXBP3O00186 592 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 MEIS2O14770 477 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 DUSP11O75319 330 aaKnown RBP17.78■□□□□ 0.44
LINC01089-209ENST00000542933 EIF2AK2P19525 551 aaKnown RBP17.78■□□□□ 0.44
LINC01089-209ENST00000542933 TAPT1Q6NXT6 567 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 TRIM22Q8IYM9 498 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 ARRDC4Q8NCT1 418 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 KIF2CQ99661 725 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 SLC26A6Q9BXS9 759 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
LINC01089-209ENST00000542933 FRMPD4Q14CM0 1322 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 DNM1LO00429 736 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 PFKFB2O60825 505 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 CDKL5O76039 1030 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 ADCYAP1R1P41586 468 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 MNX1P50219 401 aaPredicted RBP17.77■□□□□ 0.44
LINC01089-209ENST00000542933 TNFAIP2Q03169 654 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 SCRN1Q12765 414 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 STXBP2Q15833 593 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 NECAB2Q7Z6G3 386 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 FCHSD1Q86WN1 690 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.44
LINC01089-209ENST00000542933 PAWRQ96IZ0 340 aaKnown RBP17.77■□□□□ 0.44
LINC01089-209ENST00000542933 PDCD2LQ9BRP1 358 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 GLT8D2Q9H1C3 349 aa17.77■□□□□ 0.44
LINC01089-209ENST00000542933 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 KBTBD13C9JR72 458 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 ADCY6O43306 1168 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 NR3C2P08235 984 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 SSRP1Q08945 709 aaKnown RBP17.76■□□□□ 0.43
LINC01089-209ENST00000542933 PGM5Q15124 567 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 PKN1Q16512 942 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 TYW1BQ6NUM6 668 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
LINC01089-209ENST00000542933 RNF180Q86T96 592 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 DIS3LQ8TF46 1054 aaKnown RBP17.76■□□□□ 0.43
LINC01089-209ENST00000542933 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 CCDC12Q8WUD4 166 aaPredicted RBP17.76■□□□□ 0.43
LINC01089-209ENST00000542933 TBC1D32Q96NH3 1257 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 SPC25Q9HBM1 224 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 PDGFCQ9NRA1 345 aa17.76■□□□□ 0.43
LINC01089-209ENST00000542933 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.75■□□□□ 0.43
LINC01089-209ENST00000542933 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
LINC01089-209ENST00000542933 ESYT2A0FGR8 921 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 ADCY7P51828 1080 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 RABEP1Q15276 862 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 LRRC41Q15345 812 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 IL27Q8NEV9 243 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 UPF3AQ9H1J1 476 aaKnown RBP17.75■□□□□ 0.43
LINC01089-209ENST00000542933 C11orf49Q9H6J7 331 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
LINC01089-209ENST00000542933 GNEQ9Y223 722 aaKnown RBP17.75■□□□□ 0.43
LINC01089-209ENST00000542933 PPFIA3O75145 1194 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 EIF3JO75822 258 aaKnown RBP17.74■□□□□ 0.43
LINC01089-209ENST00000542933 DEXIO95424 95 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 PGK1P00558 417 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 COL6A1P12109 1028 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 SMPD1P17405 629 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 CST5P28325 142 aaPredicted RBP17.74■□□□□ 0.43
LINC01089-209ENST00000542933 CCND2P30279 289 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 GJA9P57773 515 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 UBE2SQ16763 222 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 ME3Q16798 604 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 DUSP28Q4G0W2 176 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 GJC2Q5T442 439 aaPredicted RBP17.74■□□□□ 0.43
LINC01089-209ENST00000542933 TLK2Q86UE8 772 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 GTF3C6Q969F1 213 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 HTATIP2Q9BUP3 242 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 WDR11Q9BZH6 1224 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 Q9Y3F1 56 aa17.74■□□□□ 0.43
LINC01089-209ENST00000542933 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
LINC01089-209ENST00000542933 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
LINC01089-209ENST00000542933 SPDYE3A6NKU9 549 aa17.73■□□□□ 0.43
LINC01089-209ENST00000542933 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■□□□ 11.9
LINC01089-209ENST00000542933 STAM2O75886 525 aa17.73■□□□□ 0.43
LINC01089-209ENST00000542933 LARGE1O95461 756 aa17.73■□□□□ 0.43
LINC01089-209ENST00000542933 MYCNP04198 464 aaPredicted RBP17.73■□□□□ 0.43
LINC01089-209ENST00000542933 MYCLP12524 364 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms