RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 TTLL1O95922 423 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 SMAD2Q15796 467 aaKnown RBP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 TCTN1Q2MV58 587 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 SLFN13Q68D06 897 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 FAM117BQ6P1L5 589 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 SESTD1Q86VW0 696 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 CEP95Q96GE4 821 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 CTAGE1Q96RT6 745 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 NSUN3Q9H649 340 aaKnown RBP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 CLDND1Q9NY35 253 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 TRIP12Q14669 1992 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 PTPRZ1P23471 2315 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 VPS13AQ96RL7 3174 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 TMEM221A6NGB7 291 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 H3BNC9 293 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 M0R296 226 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 LTBRP36941 435 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 HTRA4P83105 476 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 UBE3CQ15386 1083 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 EPC2Q52LR7 807 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 NSMFQ6X4W1 530 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 TRIM67Q6ZTA4 783 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 SUGP1Q8IWZ8 645 aaKnown RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-219ENST00000542930 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 IRF2BPLQ9H1B7 796 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 PAG1Q9NWQ8 432 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
C2CD3-219ENST00000542930 MYH4Q9Y623 1939 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 PLA2G6O60733 806 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 CKBP12277 381 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 GPM6BQ13491 265 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 CTC1Q2NKJ3 1217 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 GDF6Q6KF10 455 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-219ENST00000542930 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-219ENST00000542930 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 DHX38Q92620 1227 aaKnown RBP11.18□□□□□ -0.62
C2CD3-219ENST00000542930 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 ZNF287Q9HBT7 754 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 IL1RAPL2Q9NP60 686 aa11.18□□□□□ -0.62
C2CD3-219ENST00000542930 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
C2CD3-219ENST00000542930 MBTPS2O43462 519 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 AMHP03971 560 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 CHGBP05060 677 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 SLC1A4P43007 532 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 BAATQ14032 418 aaPredicted RBP11.17□□□□□ -0.62
C2CD3-219ENST00000542930 HSP90AB4PQ58FF6 505 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 GIMAP6Q6P9H5 292 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
C2CD3-219ENST00000542930 ERMP1Q7Z2K6 904 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 RPAINQ86UA6 219 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 CLASRPQ8N2M8 674 aaKnown RBP11.17□□□□□ -0.62
C2CD3-219ENST00000542930 FBXL6Q8N531 539 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 RHPN1Q8TCX5 695 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 PUS7LQ9H0K6 701 aaKnown RBP11.17□□□□□ -0.62
C2CD3-219ENST00000542930 ALG13Q9NP73 1137 aaKnown RBP11.17□□□□□ -0.62
C2CD3-219ENST00000542930 FAM86C1Q9NVL1 165 aa11.17□□□□□ -0.62
C2CD3-219ENST00000542930 LCTP09848 1927 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 STXBP3O00186 592 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 IFIT2P09913 472 aaKnown RBP11.16□□□□□ -0.62
C2CD3-219ENST00000542930 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
C2CD3-219ENST00000542930 SNAP25P60880 206 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 MKRN4PQ13434 485 aaPredicted RBP11.16□□□□□ -0.62
C2CD3-219ENST00000542930 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 CEP85Q6P2H3 762 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 FBXO11Q86XK2 927 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 TMEM192Q8IY95 271 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 ATOH1Q92858 354 aaPredicted RBP11.16□□□□□ -0.62
C2CD3-219ENST00000542930 COPS5Q92905 334 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 CCPG1Q9ULG6 757 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 PRR12Q9ULL5 1215 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 WDR87Q6ZQQ6 2873 aa11.16□□□□□ -0.62
C2CD3-219ENST00000542930 GSG1L2A8MUP6 293 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 LGR5O75473 907 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 PRDM1O75626 825 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 ICAM1P05362 532 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 MCCP23508 829 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 EDNRBP24530 442 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 ZXDAP98168 799 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 DLX2Q07687 328 aaPredicted RBP11.15□□□□□ -0.62
C2CD3-219ENST00000542930 PDE4DQ08499 809 aa11.15□□□□□ -0.62
C2CD3-219ENST00000542930 PTK7Q13308 1070 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms