RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
TNC-212ENST00000542877 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
TNC-212ENST00000542877 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
TNC-212ENST00000542877 HVCN1Q96D96 273 aa14.29□□□□□ -0.12
TNC-212ENST00000542877 NT5C1BQ96P26 610 aa14.29□□□□□ -0.12
TNC-212ENST00000542877 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
TNC-212ENST00000542877 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
TNC-212ENST00000542877 GCFC2P16383 781 aaKnown RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 IFNAR1P17181 557 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 GPATCH4Q5T3I0 446 aaKnown RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 RINT1Q6NUQ1 792 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 MAP7D3Q8IWC1 876 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 GSDMBQ8TAX9 411 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 NACA2Q9H009 215 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 HESX1Q9UBX0 185 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 SLFN13Q68D06 897 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 TRIM42Q8IWZ5 723 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 GREM2Q9H772 168 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 SRPRBQ9Y5M8 271 aaKnown RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 LRRD1A4D1F6 860 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 M0QZ92 97 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 SESN3P58005 492 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ICA1Q05084 483 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ACRBPQ8NEB7 543 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 IFNAR2P48551 515 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 PPP1R2P3Q6NXS1 205 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 SMYD4Q8IYR2 804 aaPredicted RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 CSRNP1Q96S65 589 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ZNF277Q9NRM2 450 aaPredicted RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 SOWAHDA6NJG2 315 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 SH2B2O14492 632 aaPredicted RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 SART1O43290 800 aaKnown RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 INHBAP08476 426 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ADD2P35612 726 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 FAM81BQ96LP2 452 aa14.28□□□□□ -0.12
TNC-212ENST00000542877 PUS3Q9BZE2 481 aaKnown RBP14.28□□□□□ -0.12
TNC-212ENST00000542877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.12
TNC-212ENST00000542877 ALAS1P13196 640 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 CCNE1P24864 410 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 DDX27Q96GQ7 796 aaKnown RBP14.27□□□□□ -0.12
TNC-212ENST00000542877 AMNQ9BXJ7 453 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 STK32BQ9NY57 414 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 COBLO75128 1261 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 NDUFA10O95299 355 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 YWHAGP61981 247 aaKnown RBP eCLIP14.27□□□□□ -0.12
TNC-212ENST00000542877 C2orf54Q08AI8 447 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 EEF2KMTQ96G04 330 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 MLXIPQ9HAP2 919 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 SAMSN1Q9NSI8 373 aaKnown RBP14.27□□□□□ -0.12
TNC-212ENST00000542877 PTPN22Q9Y2R2 807 aa14.27□□□□□ -0.12
TNC-212ENST00000542877 DISP1Q96F81 1524 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 TMEM2Q9UHN6 1383 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 POC1B-GALNT4F8VUJ3 575 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 ZMYND10O75800 440 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 KAZNQ674X7 775 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 SARM1Q6SZW1 724 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 NHEJ1Q9H9Q4 299 aaPredicted RBP14.27□□□□□ -0.13
TNC-212ENST00000542877 TTC36A6NLP5 189 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 NNTQ13423 1086 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 TNFAIP1Q13829 316 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 SEPT2Q15019 361 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 CCDC17Q96LX7 622 aa14.27□□□□□ -0.13
TNC-212ENST00000542877 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
TNC-212ENST00000542877 ACTR5Q9H9F9 607 aaPredicted RBP14.27□□□□□ -0.13
TNC-212ENST00000542877 GOLGA8QA0A0J9YX86 632 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 GOLGA8OA6NCC3 632 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 GOLGA8NF8WBI6 632 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 ECEL1O95672 775 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 CYP4A11Q02928 519 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 PSMD2Q13200 908 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 HSP90AA5PQ58FG0 334 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 FAM186BQ8IYM0 893 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 SCYL1Q96KG9 808 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 ATP8A1Q9Y2Q0 1164 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 CAPN9O14815 690 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 KRT3P12035 628 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 SLMAPQ14BN4 828 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 POMGNT1Q8WZA1 660 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 ADPGKQ9BRR6 497 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
TNC-212ENST00000542877 ECM2O94769 699 aaPredicted RBP14.26□□□□□ -0.13
TNC-212ENST00000542877 PIK3CAP42336 1068 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 PLTPP55058 493 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 CASP8Q14790 479 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 H7C0C1 242 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
TNC-212ENST00000542877 CTNND1O60716 968 aaKnown RBP14.26□□□□□ -0.13
TNC-212ENST00000542877 ATP5OP48047 213 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms