RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 H3BQV1 296 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 POTEB2H3BUK9 544 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 TNPO2O14787 897 aaKnown RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 FOXN1O15353 648 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 MAFGO15525 162 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 STAM2O75886 525 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 NR3C2P08235 984 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 ZSCAN22P10073 491 aaPredicted RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 HSPA8P11142 646 aaKnown RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 HOXA13P31271 388 aaPredicted RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 SREBF1P36956 1147 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 TOB1P50616 345 aaPredicted RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 GUCY1B3Q02153 619 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 RESTQ13127 1097 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 NR5A1Q13285 461 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PGM5Q15124 567 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 UBE2SQ16763 222 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 IFFO2Q5TF58 517 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PCNX4Q63HM2 1172 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 OLFML2BQ68BL8 750 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PPP4R3AQ6IN85 833 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 MOXD1Q6UVY6 613 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 SLC30A10Q6XR72 485 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 KRT25Q7Z3Z0 450 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 BRAPQ7Z569 592 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 DPP9Q86TI2 863 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 CCAR1Q8IX12 1150 aaKnown RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PXYLP1Q8TE99 480 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 SOCS4Q8WXH5 440 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 MAML3Q96JK9 1138 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PURBQ96QR8 312 aaKnown RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 RMDN3Q96TC7 470 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PDCD2LQ9BRP1 358 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 ARHGAP39Q9C0H5 1083 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PXMP2Q9NR77 195 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 SLC5A4Q9NY91 659 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 DAXXQ9UER7 740 aaPredicted RBP6.71□□□□□ -1.34
ABCF1-207ENST00000542772 SRRDQ9UH36 339 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 GABRQQ9UN88 632 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 LCTP09848 1927 aa6.71□□□□□ -1.34
ABCF1-207ENST00000542772 PLXNA1Q9UIW2 1896 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 RBM47A0AV96 593 aaKnown RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ASB14A6NK59 587 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 SPDYE3A6NKU9 549 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 B4DLN1 442 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 MEIS1O00470 390 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 EIF3JO75822 258 aaKnown RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 RGS20O76081 388 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 SNAI1O95863 264 aaPredicted RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 F13A1P00488 732 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 PGK2P07205 417 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ICAM3P32942 547 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 RGS2P41220 211 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 TRAPPC10P48553 1259 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 CTCFP49711 727 aaPredicted RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 FLT3LGP49771 235 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ALDH5A1P51649 535 aaPredicted RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ORC2Q13416 577 aaPredicted RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 PKP1Q13835 747 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 NONOQ15233 471 aaKnown RBP eCLIP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 RILPL1Q5EBL4 403 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ARHGEF16Q5VV41 709 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ATL3Q6DD88 541 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 NIPA1Q7RTP0 329 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 FCHSD1Q86WN1 690 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 TRMT44Q8IYL2 757 aaKnown RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 C4orf32Q8N8J7 132 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 CD99L2Q8TCZ2 262 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 RASGRP4Q8TDF6 673 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 TBCKQ8TEA7 893 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 TINF2Q9BSI4 451 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 ANO3Q9BYT9 981 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 KATNBL1Q9H079 304 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 CHMP5Q9NZZ3 219 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 UBIAD1Q9Y5Z9 338 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 MORC2Q9Y6X9 1032 aaPredicted RBP6.7□□□□□ -1.34
ABCF1-207ENST00000542772 SYNGAP1Q96PV0 1343 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 MYH7BA7E2Y1 1941 aa6.7□□□□□ -1.34
ABCF1-207ENST00000542772 RBBP6Q7Z6E9 1792 aaKnown RBP6.69□□□□□ -1.34
ABCF1-207ENST00000542772 IGLV3-22A0A075B6J6 115 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 CCDC194A0A1B0GVG4 234 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 HSPA1AP0DMV8 641 aaKnown RBP6.69□□□□□ -1.34
ABCF1-207ENST00000542772 HSPA1BP0DMV9 641 aaKnown RBP6.69□□□□□ -1.34
ABCF1-207ENST00000542772 TGFB3P10600 412 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 CYP2B6P20813 491 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 ARHGAP4P98171 946 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 STXBP2Q15833 593 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 INF2Q27J81 1249 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 Q4G0T1 1027 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 WDR78Q5VTH9 848 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 TAPT1Q6NXT6 567 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 CLEC17AQ6ZS10 378 aa6.69□□□□□ -1.34
ABCF1-207ENST00000542772 PIK3AP1Q6ZUJ8 805 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms