RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 NAPAP54920 295 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 STK3Q13188 491 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
DDX11-221ENST00000542661 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 IQSEC1Q6DN90 963 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 SMARCC2Q8TAQ2 1214 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
DDX11-221ENST00000542661 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 BARHL2Q9NY43 387 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 COL20A1Q9P218 1284 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
DDX11-221ENST00000542661 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
DDX11-221ENST00000542661 RABEP1Q15276 862 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 STXBP2Q15833 593 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
DDX11-221ENST00000542661 PHKBQ93100 1093 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 KIF2CQ99661 725 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 XPNPEP3Q9NQH7 507 aa16.31■□□□□ 0.2
DDX11-221ENST00000542661 MKI67P46013 3256 aaKnown RBP16.3■□□□□ 0.2
DDX11-221ENST00000542661 STXBP3O00186 592 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 MEIS2O14770 477 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 EIF3JO75822 258 aaKnown RBP16.3■□□□□ 0.2
DDX11-221ENST00000542661 NR3C2P08235 984 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 EIF2AK2P19525 551 aaKnown RBP16.3■□□□□ 0.2
DDX11-221ENST00000542661 TNFAIP2Q03169 654 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 TAPT1Q6NXT6 567 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 EEPD1Q7L9B9 569 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 FBXO16Q8IX29 292 aaPredicted RBP16.3■□□□□ 0.2
DDX11-221ENST00000542661 SPC25Q9HBM1 224 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
DDX11-221ENST00000542661 TNRC18O15417 2968 aaPredicted RBP16.3■□□□□ 0.2
DDX11-221ENST00000542661 RBM47A0AV96 593 aaKnown RBP16.29■□□□□ 0.2
DDX11-221ENST00000542661 DNM1LO00429 736 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 CCND2P30279 289 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 ADCY7P51828 1080 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 SCRN1Q12765 414 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 PKN1Q16512 942 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 XRRA1Q6P2D8 792 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 USP17L6PQ6QN14 398 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
DDX11-221ENST00000542661 RNF180Q86T96 592 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
DDX11-221ENST00000542661 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 EHMT1Q9H9B1 1298 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 SH3GLB2Q9NR46 395 aa16.29■□□□□ 0.2
DDX11-221ENST00000542661 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
DDX11-221ENST00000542661 LRRC37A2A6NM11 1700 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 KBTBD13C9JR72 458 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 STAM2O75886 525 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 DEXIO95424 95 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
DDX11-221ENST00000542661 PGM5Q15124 567 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 ME3Q16798 604 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 ANO1Q5XXA6 986 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 MCTP2Q6DN12 878 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 VSIG10LQ86VR7 867 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 PAWRQ96IZ0 340 aaKnown RBP16.28■□□□□ 0.2
DDX11-221ENST00000542661 WDR11Q9BZH6 1224 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 Q9Y3F1 56 aa16.28■□□□□ 0.2
DDX11-221ENST00000542661 SYNRGQ9UMZ2 1314 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
DDX11-221ENST00000542661 ST18O60284 1047 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 MYCLP12524 364 aaPredicted RBP16.27■□□□□ 0.2
DDX11-221ENST00000542661 GNA11P29992 359 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 ADCYAP1R1P41586 468 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 TTLL4Q14679 1199 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 LRRC41Q15345 812 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 DUSP28Q4G0W2 176 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 TYW1BQ6NUM6 668 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 BICD2Q8TD16 824 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
DDX11-221ENST00000542661 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
DDX11-221ENST00000542661 C6orf50Q9HD87 102 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 PDGFCQ9NRA1 345 aa16.27■□□□□ 0.2
DDX11-221ENST00000542661 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
DDX11-221ENST00000542661 PGK1P00558 417 aa16.26■□□□□ 0.19
DDX11-221ENST00000542661 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
DDX11-221ENST00000542661 SMPD1P17405 629 aa16.26■□□□□ 0.19
DDX11-221ENST00000542661 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
DDX11-221ENST00000542661 GJA9P57773 515 aa16.26■□□□□ 0.19
DDX11-221ENST00000542661 UBE2SQ16763 222 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms