RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 CYTH3O43739 400 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 TXNP10599 105 aaKnown RBP19.06■□□□□ 0.64
CCND1-205ENST00000542367 MCM5P33992 734 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 COL9A3Q14050 684 aaPredicted RBP19.06■□□□□ 0.64
CCND1-205ENST00000542367 GPR153Q6NV75 609 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 FAM126BQ8IXS8 530 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 SLC43A3Q8NBI5 491 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 COPS5Q92905 334 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 IWS1Q96ST2 819 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 TBX21Q9UL17 535 aa19.06■□□□□ 0.64
CCND1-205ENST00000542367 GRIN2DO15399 1336 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 TIMP1P01033 207 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 CPT1AP50416 773 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 HSD17B4P51659 736 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 PSMC6P62333 389 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 TTLL4Q14679 1199 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 STXBP2Q15833 593 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 ARHGEF16Q5VV41 709 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 ZNF654Q8IZM8 581 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 MTA3Q9BTC8 594 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 MYL10Q9BUA6 226 aa19.05■□□□□ 0.64
CCND1-205ENST00000542367 PNMA6FA0A0J9YX94 578 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 DDAH1O94760 285 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 ARIH2O95376 493 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 CD4P01730 458 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 MYL3P08590 195 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 EIF2AK2P19525 551 aaKnown RBP19.04■□□□□ 0.64
CCND1-205ENST00000542367 EPHB4P54760 987 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 GHRHRQ02643 423 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 TRAF1Q13077 416 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 NFXL1Q6ZNB6 911 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 SEPT14Q6ZU15 432 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 TMTC2Q8N394 836 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 PIBF1Q8WXW3 757 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 TMEM87BQ96K49 555 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 MAP3K14Q99558 947 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 PXMP2Q9NR77 195 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 POLR3EQ9NVU0 708 aa19.04■□□□□ 0.64
CCND1-205ENST00000542367 MAP3K20Q9NYL2 800 aaKnown RBP19.04■□□□□ 0.64
CCND1-205ENST00000542367 LAMA2P24043 3122 aaKnown RBP19.03■□□□□ 0.64
CCND1-205ENST00000542367 CCDC69A6NI79 296 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 SH2B2O14492 632 aaPredicted RBP19.03■□□□□ 0.64
CCND1-205ENST00000542367 CDC45O75419 566 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 NR3C2P08235 984 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 HOXA13P31271 388 aaPredicted RBP19.03■□□□□ 0.64
CCND1-205ENST00000542367 FPGSQ05932 587 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 BRDTQ58F21 947 aaPredicted RBP19.03■□□□□ 0.64
CCND1-205ENST00000542367 CCDC62Q6P9F0 684 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 SAMD3Q8N6K7 520 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 CTCFLQ8NI51 663 aaPredicted RBP19.03■□□□□ 0.64
CCND1-205ENST00000542367 SEZ6LQ9BYH1 1024 aa19.03■□□□□ 0.64
CCND1-205ENST00000542367 KIF5BP33176 963 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 PURAQ00577 322 aaKnown RBP19.02■□□□□ 0.64
CCND1-205ENST00000542367 LY6KQ17RY6 165 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 RNF20Q5VTR2 975 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 MFSD5Q6N075 450 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 Q7L0L9 218 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 DEFB123Q8N688 67 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
CCND1-205ENST00000542367 LRRC2Q9BYS8 371 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 PPP1R12CQ9BZL4 782 aa19.02■□□□□ 0.64
CCND1-205ENST00000542367 A6NJR5 290 aa19.01■□□□□ 0.63
CCND1-205ENST00000542367 GCOM1H8Y6P7 765 aaPredicted RBP19.01■□□□□ 0.63
CCND1-205ENST00000542367 EIF3JO75822 258 aaKnown RBP19.01■□□□□ 0.63
CCND1-205ENST00000542367 POLR2MP0CAP2 368 aa19.01■□□□□ 0.63
CCND1-205ENST00000542367 LIFRP42702 1097 aa19.01■□□□□ 0.63
CCND1-205ENST00000542367 PDCD2LQ9BRP1 358 aa19.01■□□□□ 0.63
CCND1-205ENST00000542367 TRPV6Q9H1D0 765 aa19.01■□□□□ 0.63
CCND1-205ENST00000542367 B4GALT4O60513 344 aa19■□□□□ 0.63
CCND1-205ENST00000542367 KPNA6O60684 536 aa19■□□□□ 0.63
CCND1-205ENST00000542367 MYCLP12524 364 aaPredicted RBP19■□□□□ 0.63
CCND1-205ENST00000542367 RXRAP19793 462 aa19■□□□□ 0.63
CCND1-205ENST00000542367 SMARCA1P28370 1054 aa19■□□□□ 0.63
CCND1-205ENST00000542367 GNAQP50148 359 aa19■□□□□ 0.63
CCND1-205ENST00000542367 FCHSD1Q86WN1 690 aa19■□□□□ 0.63
CCND1-205ENST00000542367 RRP36Q96EU6 259 aaKnown RBP19■□□□□ 0.63
CCND1-205ENST00000542367 NEK1Q96PY6 1258 aa19■□□□□ 0.63
CCND1-205ENST00000542367 LZTS2Q9BRK4 669 aa19■□□□□ 0.63
CCND1-205ENST00000542367 SPZ1Q9BXG8 430 aa19■□□□□ 0.63
CCND1-205ENST00000542367 PLEKHA8P1O95397 391 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 GH1P01241 217 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 CALM1P0DP23 149 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 CALM2P0DP24 149 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 CALM3P0DP25 149 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 CYP2C18P33260 490 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 ARHGAP1Q07960 439 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 CMTR1Q8N1G2 835 aaKnown RBP18.99■□□□□ 0.63
CCND1-205ENST00000542367 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
CCND1-205ENST00000542367 AFG1LQ8WV93 481 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 RNPC3Q96LT9 517 aaKnown RBP18.99■□□□□ 0.63
CCND1-205ENST00000542367 ALDH8A1Q9H2A2 487 aaPredicted RBP18.99■□□□□ 0.63
CCND1-205ENST00000542367 DDX41Q9UJV9 622 aaKnown RBP18.99■□□□□ 0.63
CCND1-205ENST00000542367 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 KIAA1217Q5T5P2 1943 aa18.99■□□□□ 0.63
CCND1-205ENST00000542367 CSF2RAP15509 400 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 PPIGQ13427 754 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCND1-205ENST00000542367 PGM5Q15124 567 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 NBPF20Q3BBV1 942 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms