RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-206ENST00000542310 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-206ENST00000542310 A6NJR5 290 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 ZBTB5O15062 677 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 B4GALT4O60513 344 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 CSF2RAP15509 400 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 HSD17B4P51659 736 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 GRM4Q14833 912 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 TMEM240Q5SV17 173 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 RASIP1Q5U651 963 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 STAG2Q8N3U4 1231 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
VPS33A-206ENST00000542310 ALDH8A1Q9H2A2 487 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-206ENST00000542310 IL23AQ9NPF7 189 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 GPHNQ9NQX3 736 aaPredicted RBP18.19■□□□□ 0.5
VPS33A-206ENST00000542310 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
VPS33A-206ENST00000542310 GBF1Q92538 1859 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 E7EWF7 191 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
VPS33A-206ENST00000542310 SUPT20HL2P0C7V6 817 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 TXNP10599 105 aaKnown RBP18.18■□□□□ 0.5
VPS33A-206ENST00000542310 PSMC6P62333 389 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 WTAPQ15007 396 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 CCDC62Q6P9F0 684 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 MAP4K1Q92918 833 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 MTA3Q9BTC8 594 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 MTIF3Q9H2K0 278 aaKnown RBP18.18■□□□□ 0.5
VPS33A-206ENST00000542310 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
VPS33A-206ENST00000542310 BAZ2BQ9UIF8 2168 aaKnown RBP18.17■□□□□ 0.5
VPS33A-206ENST00000542310 OPLAHO14841 1288 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 ARIH2O95376 493 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 MYL3P08590 195 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 CYP2C18P33260 490 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 PTPN11Q06124 597 aaPredicted RBP18.17■□□□□ 0.5
VPS33A-206ENST00000542310 STXBP2Q15833 593 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 FAM161BQ96MY7 647 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 TTYH1Q9H313 450 aaPredicted RBP18.17■□□□□ 0.5
VPS33A-206ENST00000542310 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 VAT1LQ9HCJ6 419 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 PXMP2Q9NR77 195 aa18.17■□□□□ 0.5
VPS33A-206ENST00000542310 MYH7BA7E2Y1 1941 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 DNAJB2P25686 324 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 TROAPQ12815 778 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 ARHGEF16Q5VV41 709 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
VPS33A-206ENST00000542310 HERVK_113Q902F9 699 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 MAP3K14Q99558 947 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 TRPV6Q9H1D0 765 aa18.16■□□□□ 0.5
VPS33A-206ENST00000542310 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
VPS33A-206ENST00000542310 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
VPS33A-206ENST00000542310 EIF3JO75822 258 aaKnown RBP18.15■□□□□ 0.5
VPS33A-206ENST00000542310 CFBP00751 764 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 GH1P01241 217 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 PFKMP08237 780 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 ZNF365Q70YC5 407 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 CATIPQ7Z7H3 387 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 COPS5Q92905 334 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 EMID1Q96A84 441 aaPredicted RBP18.15■□□□□ 0.5
VPS33A-206ENST00000542310 CDX2Q99626 313 aaPredicted RBP18.15■□□□□ 0.5
VPS33A-206ENST00000542310 WNT8AQ9H1J5 351 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 UMODL1Q5DID0 1318 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
VPS33A-206ENST00000542310 DDAH1O94760 285 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 MMP3P08254 477 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 EIF2AK2P19525 551 aaKnown RBP18.14■□□□□ 0.49
VPS33A-206ENST00000542310 ANTXR2P58335 489 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 ARHGAP1Q07960 439 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 TMEM67Q5HYA8 995 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 RPUSD2Q8IZ73 545 aaKnown RBP18.14■□□□□ 0.49
VPS33A-206ENST00000542310 TRMT13Q9NUP7 481 aaKnown RBP18.14■□□□□ 0.49
VPS33A-206ENST00000542310 EYSQ5T1H1 3165 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 UNC80Q8N2C7 3258 aa18.14■□□□□ 0.49
VPS33A-206ENST00000542310 PITPNM1O00562 1244 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 NR3C2P08235 984 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 ACRP10323 421 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 SLC35G1Q2M3R5 365 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 NBPF20Q3BBV1 942 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 SESTD1Q86VW0 696 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 HOMER1Q86YM7 354 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 IGDCC4Q8TDY8 1250 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 TIFAQ96CG3 184 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 PDCD2LQ9BRP1 358 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 SENP2Q9HC62 589 aa18.13■□□□□ 0.49
VPS33A-206ENST00000542310 PNMA6FA0A0J9YX94 578 aa18.12■□□□□ 0.49
VPS33A-206ENST00000542310 CYTH3O43739 400 aa18.12■□□□□ 0.49
VPS33A-206ENST00000542310 FGBP02675 491 aa18.12■□□□□ 0.49
VPS33A-206ENST00000542310 RFC2P35250 354 aa18.12■□□□□ 0.49
VPS33A-206ENST00000542310 CCL23P55773 120 aa18.12■□□□□ 0.49
VPS33A-206ENST00000542310 RAB30Q15771 203 aa18.12■□□□□ 0.49
VPS33A-206ENST00000542310 LY6KQ17RY6 165 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms