RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 PLA2G6O60733 806 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 HOXA7P31268 230 aaPredicted RBP16.6■□□□□ 0.25
DDX11-219ENST00000542242 TYRO3Q06418 890 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 TAF1CQ15572 869 aaPredicted RBP16.6■□□□□ 0.25
DDX11-219ENST00000542242 SPECC1Q5M775 1068 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 POTEEQ6S8J3 1075 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 SASS6Q6UVJ0 657 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 FEM1BQ9UK73 627 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 KCNH3Q9ULD8 1083 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 PLXNB2O15031 1838 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 COL11A1P12107 1806 aaPredicted RBP16.6■□□□□ 0.25
DDX11-219ENST00000542242 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
DDX11-219ENST00000542242 BCRP11274 1271 aa16.59■□□□□ 0.25
DDX11-219ENST00000542242 TRAF1Q13077 416 aa16.59■□□□□ 0.25
DDX11-219ENST00000542242 UBE2SQ16763 222 aa16.59■□□□□ 0.25
DDX11-219ENST00000542242 ARL6IP4Q66PJ3 421 aaKnown RBP16.59■□□□□ 0.25
DDX11-219ENST00000542242 RNF214Q8ND24 703 aa16.59■□□□□ 0.25
DDX11-219ENST00000542242 TBCKQ8TEA7 893 aa16.59■□□□□ 0.25
DDX11-219ENST00000542242 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 WDR46O15213 610 aaKnown RBP16.58■□□□□ 0.24
DDX11-219ENST00000542242 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
DDX11-219ENST00000542242 SOX10P56693 466 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 ORC2Q13416 577 aaPredicted RBP16.58■□□□□ 0.24
DDX11-219ENST00000542242 LETM2Q2VYF4 491 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 GADL1Q6ZQY3 521 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 LPAR1Q92633 364 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 KIFC2Q96AC6 838 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
DDX11-219ENST00000542242 LAD1O00515 517 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 CYP2C8P10632 490 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 CTGFP29279 349 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
DDX11-219ENST00000542242 USP14P54578 494 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 USH1GQ495M9 461 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 RANBP17Q9H2T7 1088 aaKnown RBP16.57■□□□□ 0.24
DDX11-219ENST00000542242 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
DDX11-219ENST00000542242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.56■□□□□ 0.24
DDX11-219ENST00000542242 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
DDX11-219ENST00000542242 FKTNO75072 461 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 PRPHP41219 470 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 MCTP2Q6DN12 878 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 KRBA2Q6ZNG9 492 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 CNNM3Q8NE01 707 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
DDX11-219ENST00000542242 TMEM60Q9H2L4 133 aa16.56■□□□□ 0.24
DDX11-219ENST00000542242 USP17L15C9J2P7 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L13C9JLJ4 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L11C9JVI0 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L18D6R9N7 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L22D6RA61 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L17D6RBQ6 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L19D6RCP7 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L20D6RJB6 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
DDX11-219ENST00000542242 NEMFO60524 1076 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 OR52Z1P0C646 297 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 VCAM1P19320 739 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L24Q0WX57 530 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 AP3B2Q13367 1082 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 IL17AQ16552 155 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 STX1AQ16623 288 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP17L6PQ6QN14 398 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 DTHD1Q6ZMT9 781 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 USP49Q70CQ1 688 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 ANP32BQ92688 251 aaKnown RBP16.55■□□□□ 0.24
DDX11-219ENST00000542242 EPSTI1Q96J88 318 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
DDX11-219ENST00000542242 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
DDX11-219ENST00000542242 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
DDX11-219ENST00000542242 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
DDX11-219ENST00000542242 SP3Q02447 781 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
DDX11-219ENST00000542242 LONRF3Q496Y0 759 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 ANO6Q4KMQ2 910 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 ELOA2Q8IYF1 753 aaPredicted RBP16.54■□□□□ 0.24
DDX11-219ENST00000542242 PDILTQ8N807 584 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
DDX11-219ENST00000542242 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 KIAA1468Q9P260 1216 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 SERTAD1Q9UHV2 236 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 CPA4Q9UI42 421 aa16.54■□□□□ 0.24
DDX11-219ENST00000542242 ABCB11O95342 1321 aa16.53■□□□□ 0.24
DDX11-219ENST00000542242 MEIS2O14770 477 aa16.53■□□□□ 0.24
DDX11-219ENST00000542242 FOSP01100 380 aaPredicted RBP16.53■□□□□ 0.24
DDX11-219ENST00000542242 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
DDX11-219ENST00000542242 TXLNAP40222 546 aa16.53■□□□□ 0.24
DDX11-219ENST00000542242 LACTBP83111 547 aaPredicted RBP16.53■□□□□ 0.24
DDX11-219ENST00000542242 PKN2Q16513 984 aaKnown RBP16.53■□□□□ 0.24
DDX11-219ENST00000542242 KANK3Q6NY19 840 aa16.53■□□□□ 0.24
DDX11-219ENST00000542242 LBX2Q6XYB7 198 aa16.53■□□□□ 0.24
DDX11-219ENST00000542242 CATSPERGQ6ZRH7 1159 aa16.53■□□□□ 0.24
DDX11-219ENST00000542242 TEX2Q8IWB9 1127 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms