RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.82□□□□□ -1.48
LEMD3-204ENST00000542032 PLA2G2DQ9UNK4 145 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 HCFC2Q9Y5Z7 792 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 E9PSI1 815 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 RFXAPO00287 272 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 ITGAVP06756 1048 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 PLS3P13797 630 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 CAP1Q01518 475 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 LZTR1Q8N653 840 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 CELF2-AS1Q8N7Q2 184 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 NETO2Q8NC67 525 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 KREMEN2Q8NCW0 462 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 DPF3Q92784 378 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 TSPAN17Q96FV3 270 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 EPN3Q9H201 632 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 CLEC1BQ9P126 229 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 GULP1Q9UBP9 304 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 RWDD3Q9Y3V2 267 aa5.81□□□□□ -1.48
LEMD3-204ENST00000542032 DDAH1O94760 285 aa5.8□□□□□ -1.48
LEMD3-204ENST00000542032 GJB6O95452 261 aa5.8□□□□□ -1.48
LEMD3-204ENST00000542032 HOXC12P31275 282 aa5.8□□□□□ -1.48
LEMD3-204ENST00000542032 ZNF200P98182 395 aaPredicted RBP5.8□□□□□ -1.48
LEMD3-204ENST00000542032 INF2Q27J81 1249 aa5.8□□□□□ -1.48
LEMD3-204ENST00000542032 PLEKHO2Q8TD55 490 aa5.8□□□□□ -1.48
LEMD3-204ENST00000542032 BTN2A2Q8WVV5 523 aa5.8□□□□□ -1.48
LEMD3-204ENST00000542032 A0A1W2PQJ5 194 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 ZC3H12DA2A288 527 aaKnown RBP5.79□□□□□ -1.48
LEMD3-204ENST00000542032 F8W031 263 aaPredicted RBP5.79□□□□□ -1.48
LEMD3-204ENST00000542032 NPHS1O60500 1241 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 BUB1BO60566 1050 aaPredicted RBP5.79□□□□□ -1.48
LEMD3-204ENST00000542032 PRR5P85299 388 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 SLC10A6Q3KNW5 377 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 SV2CQ496J9 727 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 TCERG1LQ5VWI1 586 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 E4F1Q66K89 784 aaPredicted RBP5.79□□□□□ -1.48
LEMD3-204ENST00000542032 ANKS3Q6ZW76 656 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 CCDC103Q8IW40 242 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 TMEM151BQ8IW70 566 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 Q8N1Y9 231 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 HNRNPLLQ8WVV9 542 aaKnown RBP5.79□□□□□ -1.48
LEMD3-204ENST00000542032 C1orf159Q96HA4 380 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 RNF38Q9H0F5 515 aa5.79□□□□□ -1.48
LEMD3-204ENST00000542032 TMEFF2Q9UIK5 374 aaPredicted RBP5.79□□□□□ -1.48
LEMD3-204ENST00000542032 ATF2P15336 505 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 NCKAP1LP55160 1127 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 GFRA1P56159 465 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 DDR2Q16832 855 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 ACBD5Q5T8D3 534 aaPredicted RBP5.78□□□□□ -1.48
LEMD3-204ENST00000542032 WWC2Q6AWC2 1192 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 IQCEQ6IPM2 695 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 CNKSR3Q6P9H4 555 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 EEPD1Q7L9B9 569 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 CXorf38Q8TB03 319 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 CCDC140Q96MF4 163 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 KCNC2Q96PR1 638 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 RTEL1Q9NZ71 1219 aa5.78□□□□□ -1.48
LEMD3-204ENST00000542032 AKAP8O43823 692 aaKnown RBP5.77□□□□□ -1.49
LEMD3-204ENST00000542032 CPP00450 1065 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 CELA3BP08861 270 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 PFKLP17858 780 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 AFF3P51826 1226 aaKnown RBP5.77□□□□□ -1.49
LEMD3-204ENST00000542032 ZC3H6P61129 1189 aaKnown RBP5.77□□□□□ -1.49
LEMD3-204ENST00000542032 HTRA3P83110 453 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 TARBP2Q15633 366 aaKnown RBP5.77□□□□□ -1.49
LEMD3-204ENST00000542032 SF1Q15637 639 aaKnown RBP5.77□□□□□ -1.49
LEMD3-204ENST00000542032 DENND5AQ6IQ26 1287 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 CABP7Q86V35 215 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 PPP1R14AQ96A00 147 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 PEX11GQ96HA9 241 aa5.77□□□□□ -1.49
LEMD3-204ENST00000542032 ADAMTS20P59510 1910 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 A0A1W2PQU0 124 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 TRIM13O60858 407 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 ZBTB7AO95365 584 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 ASGR2P07307 311 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 NCAM1P13591 858 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 PUM1Q14671 1186 aaKnown RBP eCLIP5.76□□□□□ -1.49
LEMD3-204ENST00000542032 SLC9A5Q14940 896 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 SLC35F1Q5T1Q4 408 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 RIOX2Q8IUF8 465 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 MARCH10Q8NA82 808 aaPredicted RBP5.76□□□□□ -1.49
LEMD3-204ENST00000542032 CPA5Q8WXQ8 436 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 RXFP1Q9HBX9 757 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 NUDT5Q9UKK9 219 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 NPFFR2Q9Y5X5 522 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 X6R8D5 127 aa5.76□□□□□ -1.49
LEMD3-204ENST00000542032 PLA2G1BP04054 148 aaKnown RBP5.75□□□□□ -1.49
LEMD3-204ENST00000542032 FUCA1P04066 466 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 NTRK1P04629 796 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 SNRPB2P08579 225 aaKnown RBP5.75□□□□□ -1.49
LEMD3-204ENST00000542032 PMLP29590 882 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 GRIA2P42262 883 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 PPP2R2AP63151 447 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 FOXO4P98177 505 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 KCNAB2Q13303 367 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 RAB33AQ14088 237 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 PRSS53Q2L4Q9 553 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 VWA3BQ502W6 1294 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 NAALADL2Q58DX5 795 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 NLRP10Q86W26 655 aa5.75□□□□□ -1.49
LEMD3-204ENST00000542032 LINC01356Q8N9X3 169 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms