RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 TNNC1P63316 161 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 NCAPHQ15003 741 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 TERF2Q15554 542 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 TSGA10Q9BZW7 698 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 SMARCAL1Q9NZC9 954 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 GOLGA6L10A0A0M3HER8 536 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 SPOPO43791 374 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 TROAPQ12815 778 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 BIRC3Q13489 604 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 KRT12Q99456 494 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 NDST4Q9H3R1 872 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 PACSIN2Q9UNF0 486 aaPredicted RBP17.77■□□□□ 0.44
VARS2-212ENST00000542001 ESYT3A0FGR9 886 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 STK4Q13043 487 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 PHLDB2Q86SQ0 1253 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 FBXO11Q86XK2 927 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 PROCA1Q8NCQ7 364 aaPredicted RBP17.77■□□□□ 0.44
VARS2-212ENST00000542001 FAM217BQ9NTX9 383 aaPredicted RBP17.77■□□□□ 0.44
VARS2-212ENST00000542001 HDAC9Q9UKV0 1011 aa17.77■□□□□ 0.44
VARS2-212ENST00000542001 H0YIN7 160 aa17.77■□□□□ 0.43
VARS2-212ENST00000542001 ALAS1P13196 640 aa17.77■□□□□ 0.43
VARS2-212ENST00000542001 AKR1B1P15121 316 aa17.77■□□□□ 0.43
VARS2-212ENST00000542001 INTS5Q6P9B9 1019 aaKnown RBP17.77■□□□□ 0.43
VARS2-212ENST00000542001 ZNF185O15231 689 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 ACTN4O43707 911 aaKnown RBP17.76■□□□□ 0.43
VARS2-212ENST00000542001 CFAP221Q4G0U5 840 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 BPIFA3Q9BQP9 254 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 PHF20Q9BVI0 1012 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 PCIF1Q9H4Z3 704 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 SEMA3EO15041 775 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 TTLL1O95922 423 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 ATP2C1P98194 919 aaPredicted RBP17.76■□□□□ 0.43
VARS2-212ENST00000542001 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 GPATCH11Q8N954 259 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 TRIM58Q8NG06 486 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 NKX2-3Q8TAU0 364 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 PANX2Q96RD6 677 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 EEF1GP26641 437 aaKnown RBP17.76■□□□□ 0.43
VARS2-212ENST00000542001 GPSM2P81274 684 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 RBM43Q6ZSC3 357 aaKnown RBP17.76■□□□□ 0.43
VARS2-212ENST00000542001 ZNF579Q8NAF0 562 aaKnown RBP17.76■□□□□ 0.43
VARS2-212ENST00000542001 CSRNP1Q96S65 589 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
VARS2-212ENST00000542001 PPANQ9NQ55 473 aaKnown RBP17.76■□□□□ 0.43
VARS2-212ENST00000542001 CC2D1AQ6P1N0 951 aaPredicted RBP17.75■□□□□ 0.43
VARS2-212ENST00000542001 NBPF3Q9H094 633 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 POTEB3A0JP26 581 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 POTECB2RU33 542 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 ZBTB22O15209 634 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
VARS2-212ENST00000542001 POTEBQ6S5H4 581 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 BHMT2Q9H2M3 363 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.75■□□□□ 0.43
VARS2-212ENST00000542001 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 WDR19Q8NEZ3 1342 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
VARS2-212ENST00000542001 IVLP07476 585 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 CASP8Q14790 479 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 C12orf60Q5U649 245 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 ANKRD40Q6AI12 368 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 CPLX4Q7Z7G2 160 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 AGXT2Q9BYV1 514 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 HYOU1Q9Y4L1 999 aa17.75■□□□□ 0.43
VARS2-212ENST00000542001 NYAP1Q6ZVC0 841 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 OTUD6BQ8N6M0 293 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 DHTKD1Q96HY7 919 aaPredicted RBP17.74■□□□□ 0.43
VARS2-212ENST00000542001 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 KIF11P52732 1056 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 HNRNPH2P55795 449 aaKnown RBP17.74■□□□□ 0.43
VARS2-212ENST00000542001 CTTNQ14247 550 aaKnown RBP17.74■□□□□ 0.43
VARS2-212ENST00000542001 ABCB5Q2M3G0 1257 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 PTF1AQ7RTS3 328 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 USTQ9Y2C2 406 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 A0A0U1RQJ8 604 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 TESPA1A2RU30 521 aaPredicted RBP17.74■□□□□ 0.43
VARS2-212ENST00000542001 TADA3O75528 432 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 TAB3Q8N5C8 712 aaPredicted RBP17.74■□□□□ 0.43
VARS2-212ENST00000542001 CCDC155Q8N6L0 562 aa17.74■□□□□ 0.43
VARS2-212ENST00000542001 FKBP3Q00688 224 aaKnown RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 GFPT1Q06210 699 aaPredicted RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 SEPT2Q15019 361 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 DLGAP5Q15398 846 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 CEP85LQ5SZL2 805 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 FAM178BQ8IXR5 827 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 RIN2Q8WYP3 895 aaPredicted RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 TDRD3Q9H7E2 651 aaKnown RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 EPB41L5Q9HCM4 733 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 ADD3Q9UEY8 706 aaKnown RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 POTEFA5A3E0 1075 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 ZBED6P86452 979 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms