RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 FBRSQ9HAH7 460 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 CEMIPQ8WUJ3 1361 aa6.95□□□□□ -1.3
CPSF7-220ENST00000541963 VIRMAQ69YN4 1812 aaKnown RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 MRC1P22897 1456 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 FAM86C2PA6NEL3 165 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 RGS13O14921 159 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 DHX15O43143 795 aaKnown RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 SNRPA1P09661 255 aaKnown RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 CYP19A1P11511 503 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 BMP3P12645 472 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 SERINC3Q13530 473 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 SLBPQ14493 270 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 NCAPHQ15003 741 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 DDR2Q16832 855 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 PRAMEF13Q5VWM6 474 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 INTS5Q6P9B9 1019 aaKnown RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 PAOXQ6QHF9 649 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 ARMCX6Q7L4S7 300 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 CYB5D2Q8WUJ1 264 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 RUNDC1Q96C34 613 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 ZNF496Q96IT1 587 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 DEPDC7Q96QD5 511 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 UBL7Q96S82 380 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-220ENST00000541963 SLC9A7Q96T83 725 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 KIF2CQ99661 725 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 CCDC113Q9H0I3 377 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.38e-9■■□□□ 12.1
CPSF7-220ENST00000541963 ACSS3Q9H6R3 686 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 UBR3Q6ZT12 1888 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 HEG1Q9ULI3 1381 aa6.94□□□□□ -1.3
CPSF7-220ENST00000541963 ADAMTS7Q9UKP4 1686 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 FAM95CA0A1B0GW59 222 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-220ENST00000541963 DNAJA2O60884 412 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 NFICP08651 508 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 MAP4P27816 1152 aaKnown RBP6.93□□□□□ -1.3
CPSF7-220ENST00000541963 NTF4P34130 210 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 TMPOP42166 694 aaKnown RBP6.93□□□□□ -1.3
CPSF7-220ENST00000541963 DCTN1Q14203 1278 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 NFKBIBQ15653 356 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 GPR162Q16538 588 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 NKG7Q16617 165 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 FAM178BQ8IXR5 827 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 XAGE3Q8WTP9 111 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 MYRFLQ96LU7 910 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 DPH2Q9BQC3 489 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-220ENST00000541963 BABAM1Q9NWV8 329 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
CPSF7-220ENST00000541963 CLEC3AO75596 197 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 MMP10P09238 476 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 NAT2P11245 290 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 GYS1P13807 737 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 IL6STP40189 918 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-220ENST00000541963 SLC7A5Q01650 507 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 SGO2Q562F6 1265 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 SMIM5Q71RC9 77 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 AMIGO3Q86WK7 504 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 FAM20CQ8IXL6 584 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 SEMA6CQ9H3T2 930 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 NARFQ9UHQ1 456 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 SOS1Q07889 1333 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-220ENST00000541963 COL5A3P25940 1745 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-220ENST00000541963 COL24A1Q17RW2 1714 aa6.92□□□□□ -1.3
CPSF7-220ENST00000541963 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 PDPK1O15530 556 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 KCNQ3O43525 872 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 CLSTN1O94985 981 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 GJB6O95452 261 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 ACRP10323 421 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 CYP7A1P22680 504 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 ETV3P41162 512 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 EIF5P55010 431 aaKnown RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 TGFB2P61812 414 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 CALD1Q05682 793 aaKnown RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 ZNF746Q6NUN9 644 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 GIMAP6Q6P9H5 292 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 C6orf15Q6UXA7 325 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 EEPD1Q7L9B9 569 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 DZIP1LQ8IYY4 767 aaKnown RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 EZH1Q92800 747 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-220ENST00000541963 MIPEPQ99797 713 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 PIF1Q9H611 641 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 MIS18AQ9NYP9 233 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 TSPYL4Q9UJ04 414 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 CEP131Q9UPN4 1083 aa6.91□□□□□ -1.3
CPSF7-220ENST00000541963 ZBTB1Q9Y2K1 713 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms