RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SLFN13Q68D06 897 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 PGBD1Q96JS3 809 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 ZNF408Q9H9D4 720 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 FBXO28Q9NVF7 368 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 STK36Q9NRP7 1315 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 GLTPD2A6NH11 291 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 TRIM75PA6NK02 468 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 TMEM232C9JQI7 657 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 CAPN5O15484 640 aaPredicted RBP8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 GRM5P41594 1212 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 PFKFB3Q16875 520 aaPredicted RBP8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 MAP1SQ66K74 1059 aaPredicted RBP8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 CAVIN1Q6NZI2 390 aaKnown RBP8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 CLEC17AQ6ZS10 378 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 KRT26Q7Z3Y9 468 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 EPS8L1Q8TE68 723 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 UIMC1Q96RL1 719 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 JMJD4Q9H9V9 463 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 DDX49Q9Y6V7 483 aaKnown RBP8.88□□□□□ -0.99
AC005840.3-201ENST00000541888 COL11A1P12107 1806 aaPredicted RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 PEX10O60683 326 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 SNHG28P0DPA3 235 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 MARCKSP29966 332 aaPredicted RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 RCAN1P53805 252 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 NLRP5P59047 1200 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 USH1GQ495M9 461 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 PDXDC2PQ6P474 469 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 APOBEC3FQ8IUX4 373 aaKnown RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 DCPSQ96C86 337 aaKnown RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 CLMNQ96JQ2 1002 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 SPATA32Q96LK8 384 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 FEZ1Q99689 392 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 PHF20Q9BVI0 1012 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 NYAP2Q9P242 653 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 WDR90Q96KV7 1748 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 GOLGA6L22H0YM25 854 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 STXBP3O00186 592 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 TOB1P50616 345 aaPredicted RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 KRT85P78386 507 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 UBE2SQ16763 222 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 CCDC178Q5BJE1 867 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 LEO1Q8WVC0 666 aaPredicted RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 TAF1DQ9H5J8 278 aaPredicted RBP8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 RRAGCQ9HB90 399 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 NMRK2Q9NPI5 230 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 TMEM260Q9NX78 707 aa8.87□□□□□ -0.99
AC005840.3-201ENST00000541888 BRCA2P51587 3418 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 SCN4AP35499 1836 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 TERF1P54274 439 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 NAPAP54920 295 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 GRIN1Q05586 938 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 SPP2Q13103 211 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 SF3A1Q15459 793 aaKnown RBP8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 TMEM259Q4ZIN3 620 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 ASPRV1Q53RT3 343 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 SPECC1Q5M775 1068 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 CCDC174Q6PII3 467 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 PIK3AP1Q6ZUJ8 805 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 NOSTRINQ8IVI9 506 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 RRP36Q96EU6 259 aaKnown RBP8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 WNK4Q96J92 1243 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 SPZ1Q9BXG8 430 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 PDCL3Q9H2J4 239 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 PCDHB6Q9Y5E3 794 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 MYH7BA7E2Y1 1941 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 PTPRFP10586 1907 aa8.86□□□□□ -0.99
AC005840.3-201ENST00000541888 PARP14Q460N5 1801 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 ESPNB1AK53 854 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 ASNSP08243 561 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 BMP3P12645 472 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 LIG1P18858 919 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 HMGCS2P54868 508 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 VGLL4Q14135 290 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 QRICH1Q2TAL8 776 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 WASF1Q92558 559 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 MKL1Q969V6 931 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 CDCA5Q96FF9 252 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 ZSCAN16Q9H4T2 348 aaPredicted RBP8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 RIOX1Q9H6W3 641 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 ARHGEF10LQ9HCE6 1279 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 TMEM63CQ9P1W3 806 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 BIN2Q9UBW5 565 aaPredicted RBP8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 SEC63Q9UGP8 760 aaKnown RBP8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 TMX2Q9Y320 296 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 ATP6V1DQ9Y5K8 247 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 ZHX2Q9Y6X8 837 aa8.85□□□□□ -0.99
AC005840.3-201ENST00000541888 PTPRAP18433 802 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 U2AF2P26368 475 aaKnown RBP eCLIP8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 KRT2P35908 639 aa8.84□□□□□ -0.99
AC005840.3-201ENST00000541888 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms