RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 COA7Q96BR5 231 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 CSRNP2Q9H175 543 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 SEC63Q9UGP8 760 aaKnown RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 HERC5Q9UII4 1024 aaKnown RBP7.44□□□□□ -1.22
VEGFB-203ENST00000541681 SYNPO2Q9UMS6 1093 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 PCDHA6Q9UN73 950 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 PCDHA8Q9Y5H6 950 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 KIAA1217Q5T5P2 1943 aa7.44□□□□□ -1.22
VEGFB-203ENST00000541681 COL11A1P12107 1806 aaPredicted RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PNMA6FA0A0J9YX94 578 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 SMCO2A6NFE2 343 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 SMTNL1A8MU46 457 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 BECN2A8MW95 431 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 GOLGA6L6A8MZA4 724 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 IKBKBO14920 756 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 TBC1D12O60347 775 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PEX10O60683 326 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 GOLGA8HP0CJ92 632 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 ATP2B1P20020 1258 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 MSNP26038 577 aaKnown RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 CDC25BP30305 580 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 CLCN1P35523 988 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 LONP1P36776 959 aaKnown RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 NAPAP54920 295 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 MAP3K10Q02779 954 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 ZNF174Q15697 407 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 FAM110CQ1W6H9 321 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 LONRF3Q496Y0 759 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 CT47A1Q5JQC4 288 aaPredicted RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 NT5DC1Q5TFE4 455 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 TYW1BQ6NUM6 668 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PPP1R18Q6NYC8 613 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 CHRDL2Q6WN34 429 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 C11orf57Q6ZUT1 292 aaPredicted RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 TMEM179Q6ZVK1 233 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 HEATR3Q7Z4Q2 680 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PLA2G4DQ86XP0 818 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 C4orf32Q8N8J7 132 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 TRIML1Q8N9V2 468 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 U2AF1L4Q8WU68 220 aaKnown RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 DCAF4Q8WV16 495 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PIBF1Q8WXW3 757 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 GPKOWQ92917 476 aaPredicted RBP eCLIP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 MTMR8Q96EF0 704 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 DEFB118Q96PH6 123 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PIGSQ96S52 555 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 PAGR1Q9BTK6 254 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 ASCC2Q9H1I8 757 aaPredicted RBP7.43□□□□□ -1.22
VEGFB-203ENST00000541681 DNAJC18Q9H819 358 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 ZBTB21Q9ULJ3 1066 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 CEP290O15078 2479 aa7.43□□□□□ -1.22
VEGFB-203ENST00000541681 MPHOSPH10O00566 681 aaKnown RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 POLR2DO15514 142 aaKnown RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 AP5Z1O43299 807 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 ZNF500O60304 480 aaPredicted RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 GH2P01242 217 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 TFRCP02786 760 aaKnown RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 PTMAP06454 111 aaKnown RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 GJB1P08034 283 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 ASNSP08243 561 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 PRPHP41219 470 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 GJA8P48165 433 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 GCLCP48506 637 aaPredicted RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 SARSP49591 514 aaKnown RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 TPM4P67936 248 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 JAG1P78504 1218 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 GRIN1Q05586 938 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 POSTNQ15063 836 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 NONOQ15233 471 aaKnown RBP eCLIP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 ABCB5Q2M3G0 1257 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 WDR78Q5VTH9 848 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 DHX40Q8IX18 779 aaKnown RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 ADGRF4Q8IZF3 695 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 SPATA20Q8TB22 786 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 HTATIP2Q9BUP3 242 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 UBA5Q9GZZ9 404 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 GLT8D2Q9H1C3 349 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 JMJD4Q9H9V9 463 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 VAT1LQ9HCJ6 419 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 RRAGDQ9NQL2 400 aaPredicted RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 SERTAD1Q9UHV2 236 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 COLQQ9Y215 455 aaPredicted RBP7.42□□□□□ -1.22
VEGFB-203ENST00000541681 MTMR7Q9Y216 660 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 ZKSCAN5Q9Y2L8 839 aa7.42□□□□□ -1.22
VEGFB-203ENST00000541681 MYH9P35579 1960 aaKnown RBP7.41□□□□□ -1.22
VEGFB-203ENST00000541681 DOCK3Q8IZD9 2030 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 WNT7AO00755 349 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 ZBTB5O15062 677 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 ADAMTS3O15072 1205 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 ACTN4O43707 911 aaKnown RBP7.41□□□□□ -1.22
VEGFB-203ENST00000541681 SMC2O95347 1197 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 HMGCRP04035 888 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 SLFN14P0C7P3 912 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 EEF2P13639 858 aaKnown RBP7.41□□□□□ -1.22
VEGFB-203ENST00000541681 CYP2B6P20813 491 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 MCM7P33993 719 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 ZNF75DP51815 510 aa7.41□□□□□ -1.22
VEGFB-203ENST00000541681 BACE1P56817 501 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms