RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 WDR12Q9GZL7 423 aaKnown RBP6.52□□□□□ -1.37
DDB1-219ENST00000541513 SLC6A16Q9GZN6 736 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 SLC12A5Q9H2X9 1139 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 FNIP2Q9P278 1114 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 DNM3Q9UQ16 869 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 KNDC1Q76NI1 1749 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 XRN1Q8IZH2 1706 aaKnown RBP6.52□□□□□ -1.37
DDB1-219ENST00000541513 PIK3R4Q99570 1358 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 ADGRF5Q8IZF2 1346 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TRPM1Q7Z4N2 1603 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TPP1O14773 563 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 NCAM2O15394 837 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TLL1O43897 1013 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TMCC2O75069 709 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 ADH1AP07327 375 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 MAPK9P45984 424 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 GRIA4P48058 902 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 SCNN1BP51168 640 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 PPP2R2AP63151 447 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 GABREP78334 506 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 SLC7A5Q01650 507 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 FAAP100Q0VG06 881 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 NEUROD1Q13562 356 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 PCBP2Q15366 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
DDB1-219ENST00000541513 IQSEC1Q6DN90 963 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
DDB1-219ENST00000541513 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
DDB1-219ENST00000541513 DCAF11Q8TEB1 546 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 NELL1Q92832 810 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 RPGRQ92834 1020 aaKnown RBP6.51□□□□□ -1.37
DDB1-219ENST00000541513 KLRG1Q96E93 195 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 HSH2DQ96JZ2 352 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TMEM87BQ96K49 555 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
DDB1-219ENST00000541513 SEZ6LQ9BYH1 1024 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 ZNF576Q9H609 170 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 ALG13Q9NP73 1137 aaKnown RBP6.51□□□□□ -1.37
DDB1-219ENST00000541513 PDLIM7Q9NR12 457 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TBC1D22BQ9NU19 505 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.51□□□□□ -1.37
DDB1-219ENST00000541513 TONSLQ96HA7 1378 aa6.51□□□□□ -1.37
DDB1-219ENST00000541513 PRAG1Q86YV5 1406 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 NKTRP30414 1462 aaKnown RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 A6NNZ2 444 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 B4E1Z4 1266 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 M0R2C6 588 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 M0R3H8 397 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 VAMP4O75379 141 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 BAIAP3O94812 1187 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 MT-CO1P00395 513 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CFBP00751 764 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CYP2E1P05181 493 aaPredicted RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 PABPC1P11940 636 aaKnown RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 NRLP54845 237 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 MPP1Q00013 466 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 PPFIA1Q13136 1202 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 TRIM14Q14142 442 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 LRRC14Q15048 493 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 NBPF1Q3BBV0 1214 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CFAP100Q494V2 611 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 SPATA1Q5VX52 437 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CDCA2Q69YH5 1023 aaPredicted RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 RETSATQ6NUM9 610 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 FAM180BQ6P0A1 224 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 UBE2R2Q712K3 238 aaPredicted RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 GPR155Q7Z3F1 870 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 NDUFAF2Q8N183 169 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 OR13H1Q8NG92 308 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 OSBP2Q969R2 916 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 ZNF622Q969S3 477 aaKnown RBP eCLIP6.5□□□□□ -1.374e-6■■□□□ 13.5
DDB1-219ENST00000541513 ZBTB10Q96DT7 871 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 FAXDC2Q96IV6 333 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CDHR1Q96JP9 859 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 LRGUKQ96M69 825 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CCDC138Q96M89 665 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 TRERF1Q96PN7 1200 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 BHLHE41Q9C0J9 482 aaPredicted RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 BLOC1S4Q9NUP1 217 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 TMEM39AQ9NV64 488 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 GMIPQ9P107 970 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 KANSL3Q9P2N6 904 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 STK17AQ9UEE5 414 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 ZNF214Q9UL59 606 aaPredicted RBP6.5□□□□□ -1.37
DDB1-219ENST00000541513 TPCN1Q9ULQ1 816 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 LTBP4Q8N2S1 1624 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 CPS1P31327 1500 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 ASXL1Q8IXJ9 1541 aa6.5□□□□□ -1.37
DDB1-219ENST00000541513 ADGRB1O14514 1584 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 XIRP1Q702N8 1843 aaKnown RBP6.49□□□□□ -1.37
DDB1-219ENST00000541513 RASA4BC9J798 803 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 GOLIM4O00461 696 aa6.49□□□□□ -1.37
DDB1-219ENST00000541513 RASA4O43374 803 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms