RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 BAIAP3O94812 1187 aa31.55■■■□□ 2.64
CHFR-218ENST00000540963 TTC14Q96N46 770 aa31.55■■■□□ 2.64
CHFR-218ENST00000540963 HELLSQ9NRZ9 838 aa31.55■■■□□ 2.64
CHFR-218ENST00000540963 CALML3P27482 149 aa31.54■■■□□ 2.64
CHFR-218ENST00000540963 RPS6P62753 249 aaKnown RBP31.54■■■□□ 2.64
CHFR-218ENST00000540963 VPS53Q5VIR6 699 aa31.54■■■□□ 2.64
CHFR-218ENST00000540963 EVI5LQ96CN4 794 aa31.54■■■□□ 2.64
CHFR-218ENST00000540963 SALL3Q9BXA9 1300 aa31.53■■■□□ 2.64
CHFR-218ENST00000540963 PDHBP11177 359 aa31.53■■■□□ 2.64
CHFR-218ENST00000540963 TFF2Q03403 129 aa31.53■■■□□ 2.64
CHFR-218ENST00000540963 SKIV2LQ15477 1246 aaKnown RBP31.53■■■□□ 2.64
CHFR-218ENST00000540963 HERC6Q8IVU3 1022 aa31.53■■■□□ 2.64
CHFR-218ENST00000540963 RGS22Q8NE09 1264 aa31.53■■■□□ 2.64
CHFR-218ENST00000540963 GPCPD1Q9NPB8 672 aa31.53■■■□□ 2.64
CHFR-218ENST00000540963 TET1Q8NFU7 2136 aa31.52■■■□□ 2.64
CHFR-218ENST00000540963 ZMYM6O95789 1325 aa31.52■■■□□ 2.64
CHFR-218ENST00000540963 FRMPD2Q68DX3 1309 aaPredicted RBP31.52■■■□□ 2.64
CHFR-218ENST00000540963 TRIP12Q14669 1992 aaPredicted RBP31.52■■■□□ 2.64
CHFR-218ENST00000540963 PCP11498 1178 aaKnown RBP31.52■■■□□ 2.64
CHFR-218ENST00000540963 TAP1Q03518 808 aa31.52■■■□□ 2.64
CHFR-218ENST00000540963 TOMM22Q9NS69 142 aa31.52■■■□□ 2.64
CHFR-218ENST00000540963 SNHG28P0DPA3 235 aa31.51■■■□□ 2.63
CHFR-218ENST00000540963 TXNP10599 105 aaKnown RBP31.51■■■□□ 2.63
CHFR-218ENST00000540963 PLA2G5P39877 138 aa31.51■■■□□ 2.63
CHFR-218ENST00000540963 ZNF543Q08ER8 600 aa31.51■■■□□ 2.63
CHFR-218ENST00000540963 CCDC155Q8N6L0 562 aa31.51■■■□□ 2.63
CHFR-218ENST00000540963 FTOQ9C0B1 505 aaKnown RBP eCLIP31.51■■■□□ 2.63
CHFR-218ENST00000540963 FGAP02671 866 aa31.5■■■□□ 2.63
CHFR-218ENST00000540963 CAGE1Q8TC20 777 aa31.5■■■□□ 2.63
CHFR-218ENST00000540963 NECAB3Q96P71 396 aaPredicted RBP31.5■■■□□ 2.63
CHFR-218ENST00000540963 RAPGEFL1Q9UHV5 662 aa31.5■■■□□ 2.63
CHFR-218ENST00000540963 NOD1Q9Y239 953 aa31.5■■■□□ 2.63
CHFR-218ENST00000540963 PCDHB15Q9Y5E8 787 aa31.5■■■□□ 2.63
CHFR-218ENST00000540963 RFXAPO00287 272 aa31.49■■■□□ 2.63
CHFR-218ENST00000540963 PARNO95453 639 aaKnown RBP31.49■■■□□ 2.63
CHFR-218ENST00000540963 KCNQ1P51787 676 aa31.49■■■□□ 2.63
CHFR-218ENST00000540963 SESTD1Q86VW0 696 aa31.49■■■□□ 2.63
CHFR-218ENST00000540963 RRP12Q5JTH9 1297 aaKnown RBP31.48■■■□□ 2.63
CHFR-218ENST00000540963 GPATCH4Q5T3I0 446 aaKnown RBP31.48■■■□□ 2.63
CHFR-218ENST00000540963 AFAP1L1Q8TED9 768 aa31.48■■■□□ 2.63
CHFR-218ENST00000540963 EPOPA6NHQ4 379 aa31.47■■■□□ 2.63
CHFR-218ENST00000540963 MCMDC2Q4G0Z9 681 aa31.47■■■□□ 2.63
CHFR-218ENST00000540963 ARNTL2Q8WYA1 636 aa31.47■■■□□ 2.63
CHFR-218ENST00000540963 COPS5Q92905 334 aa31.47■■■□□ 2.63
CHFR-218ENST00000540963 CERS4Q9HA82 394 aa31.47■■■□□ 2.63
CHFR-218ENST00000540963 ARIH1Q9Y4X5 557 aaPredicted RBP31.47■■■□□ 2.63
CHFR-218ENST00000540963 PTPRSQ13332 1948 aa31.47■■■□□ 2.63
CHFR-218ENST00000540963 KCNJ6P48051 423 aa31.46■■■□□ 2.63
CHFR-218ENST00000540963 PTGISQ16647 500 aa31.46■■■□□ 2.63
CHFR-218ENST00000540963 CCDC62Q6P9F0 684 aa31.46■■■□□ 2.63
CHFR-218ENST00000540963 FAM122AQ96E09 287 aa31.46■■■□□ 2.63
CHFR-218ENST00000540963 LMCD1Q9NZU5 365 aa31.46■■■□□ 2.63
CHFR-218ENST00000540963 ZBTB47Q9UFB7 747 aaPredicted RBP31.46■■■□□ 2.63
CHFR-218ENST00000540963 KIAA1217Q5T5P2 1943 aa31.45■■■□□ 2.63
CHFR-218ENST00000540963 NT5C2P49902 561 aa31.45■■■□□ 2.63
CHFR-218ENST00000540963 RBL2Q08999 1139 aa31.45■■■□□ 2.63
CHFR-218ENST00000540963 HLA-CQ95604 372 aa31.45■■■□□ 2.63
CHFR-218ENST00000540963 TLL1O43897 1013 aa31.44■■■□□ 2.62
CHFR-218ENST00000540963 HSPD1P10809 573 aaKnown RBP31.44■■■□□ 2.62
CHFR-218ENST00000540963 ARHGEF15O94989 841 aa31.43■■■□□ 2.62
CHFR-218ENST00000540963 ARIH2O95376 493 aa31.43■■■□□ 2.62
CHFR-218ENST00000540963 GRB10Q13322 594 aa31.43■■■□□ 2.62
CHFR-218ENST00000540963 MFSD6Q6ZSS7 791 aa31.43■■■□□ 2.62
CHFR-218ENST00000540963 GH1P01241 217 aa31.42■■■□□ 2.62
CHFR-218ENST00000540963 MMP3P08254 477 aa31.42■■■□□ 2.62
CHFR-218ENST00000540963 CTAGE1Q96RT6 745 aa31.42■■■□□ 2.62
CHFR-218ENST00000540963 IWS1Q96ST2 819 aa31.42■■■□□ 2.62
CHFR-218ENST00000540963 RNF41Q9H4P4 317 aaPredicted RBP31.42■■■□□ 2.62
CHFR-218ENST00000540963 COL4A4P53420 1690 aaPredicted RBP31.41■■■□□ 2.62
CHFR-218ENST00000540963 SELPP16109 830 aa31.41■■■□□ 2.62
CHFR-218ENST00000540963 CASTP20810 708 aaKnown RBP31.41■■■□□ 2.62
CHFR-218ENST00000540963 WDR5P61964 334 aaKnown RBP31.41■■■□□ 2.62
CHFR-218ENST00000540963 KRT40Q6A162 431 aa31.41■■■□□ 2.62
CHFR-218ENST00000540963 DGKHQ86XP1 1220 aa31.41■■■□□ 2.62
CHFR-218ENST00000540963 NSUN6Q8TEA1 469 aaKnown RBP31.41■■■□□ 2.62
CHFR-218ENST00000540963 PPP1R13LQ8WUF5 828 aa31.41■■■□□ 2.62
CHFR-218ENST00000540963 AFG1LQ8WV93 481 aa31.41■■■□□ 2.62
CHFR-218ENST00000540963 FAM227BQ96M60 508 aa31.41■■■□□ 2.62
CHFR-218ENST00000540963 A0A0D9SFI3 127 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 LPXNO60711 386 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 CXCL10P02778 98 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 ARHGAP1Q07960 439 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 GDF6Q6KF10 455 aaPredicted RBP31.4■■■□□ 2.62
CHFR-218ENST00000540963 CNKSR3Q6P9H4 555 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 LRRC8DQ7L1W4 858 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 ABCB11O95342 1321 aa31.4■■■□□ 2.62
CHFR-218ENST00000540963 EFCAB14O75071 495 aa31.39■■■□□ 2.62
CHFR-218ENST00000540963 PDE1AP54750 535 aa31.39■■■□□ 2.62
CHFR-218ENST00000540963 GPNMBQ14956 572 aa31.39■■■□□ 2.62
CHFR-218ENST00000540963 USH1GQ495M9 461 aa31.39■■■□□ 2.62
CHFR-218ENST00000540963 MYH6P13533 1939 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 ABHD14A-ACY1A0A1B0GW23 586 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 CCDC178Q5BJE1 867 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 ANKRD45Q5TZF3 282 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 MCF2L2Q86YR7 1114 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 ESR2Q92731 530 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 KAT2BQ92831 832 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 EMID1Q96A84 441 aaPredicted RBP31.38■■■□□ 2.61
CHFR-218ENST00000540963 GTF2IRD1Q9UHL9 959 aa31.38■■■□□ 2.61
CHFR-218ENST00000540963 HAND2P61296 217 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms