RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 MEIS2O14770 477 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 INHBEP58166 350 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 ATP2C1P98194 919 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-204ENST00000540846 NOGQ13253 232 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 MUM1L1Q5H9M0 696 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 TEX13BQ9BXU2 312 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 PLXNB2O15031 1838 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 CCDC194A0A1B0GVG4 234 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 NFIBO00712 420 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 AOC2O75106 756 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 GRIN1Q05586 938 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 TRAF1Q13077 416 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 SNRNP48Q6IEG0 339 aaKnown RBP14.17□□□□□ -0.14
SMAD3-204ENST00000540846 ELOA2Q8IYF1 753 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-204ENST00000540846 RASGRP4Q8TDF6 673 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 R3HDMLQ9H3Y0 253 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 FAM13BQ9NYF5 915 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 PCDHA6Q9UN73 950 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 PCDHA8Q9Y5H6 950 aa14.17□□□□□ -0.14
SMAD3-204ENST00000540846 ZNFX1Q9P2E3 1918 aaKnown RBP14.16□□□□□ -0.14
SMAD3-204ENST00000540846 PIK3CDO00329 1044 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 GNA11P29992 359 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 STAT3P40763 770 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 ADCY7P51828 1080 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 SREBF2Q12772 1141 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 ZNF174Q15697 407 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 KRT25Q7Z3Z0 450 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 RIOX2Q8IUF8 465 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 TBC1D5Q92609 795 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 PARK7Q99497 189 aaKnown RBP14.16□□□□□ -0.14
SMAD3-204ENST00000540846 SPATC1LQ9H0A9 340 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 PSTPIP2Q9H939 334 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 ANO10Q9NW15 660 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 KIAA1468Q9P260 1216 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 MORF4L1Q9UBU8 362 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 PNMA2Q9UL42 364 aa14.16□□□□□ -0.14
SMAD3-204ENST00000540846 LRRC37A2A6NM11 1700 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 ALAS1P13196 640 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 HSD17B4P51659 736 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 PTGDRQ13258 359 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 UBE2SQ16763 222 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 Q3C1V9 767 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 USP17L6PQ6QN14 398 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 KRBA2Q6ZNG9 492 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 PAXIP1Q6ZW49 1069 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-204ENST00000540846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMAD3-204ENST00000540846 TEX2Q8IWB9 1127 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 GTF3C2Q8WUA4 911 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-204ENST00000540846 CUL5Q93034 780 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 PAGR1Q9BTK6 254 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 MOV10L1Q9BXT6 1211 aaKnown RBP14.15□□□□□ -0.14
SMAD3-204ENST00000540846 CSRNP2Q9H175 543 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 DNAJC25Q9H1X3 360 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 CBX8Q9HC52 389 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 TMEM260Q9NX78 707 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 MRPL11Q9Y3B7 192 aaKnown RBP14.15□□□□□ -0.14
SMAD3-204ENST00000540846 ZNF236Q9UL36 1845 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 PCNTO95613 3336 aa14.15□□□□□ -0.14
SMAD3-204ENST00000540846 EDIL3O43854 480 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 BCRP11274 1271 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 GCLCP48506 637 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-204ENST00000540846 VEGFBP49765 207 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 ZNF165P49910 485 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 ERVK-24P63145 666 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 GRM1Q13255 1194 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 TKFCQ3LXA3 575 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 ARL6IP4Q66PJ3 421 aaKnown RBP14.14□□□□□ -0.15
SMAD3-204ENST00000540846 C11orf57Q6ZUT1 292 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-204ENST00000540846 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
SMAD3-204ENST00000540846 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-204ENST00000540846 TRERF1Q96PN7 1200 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 MGAMO43451 1857 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 ZSWIM8A7E2V4 1837 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 PLXNA1Q9UIW2 1896 aa14.14□□□□□ -0.15
SMAD3-204ENST00000540846 MCM7P33993 719 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 MRPL12P52815 198 aaKnown RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 LONRF3Q496Y0 759 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 SPECC1Q5M775 1068 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 C4orf32Q8N8J7 132 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 CRYGNQ8WXF5 182 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 GLT8D2Q9H1C3 349 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 HOMER2Q9NSB8 354 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 COL20A1Q9P218 1284 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 USP25Q9UHP3 1055 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 TUBE1Q9UJT0 475 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 CTDP1Q9Y5B0 961 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 HOXA13P31271 388 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 ORC2Q13416 577 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 PLS1Q14651 629 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 NONOQ15233 471 aaKnown RBP eCLIP14.13□□□□□ -0.152e-8■■■■■ 28.2
SMAD3-204ENST00000540846 TAF1CQ15572 869 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-204ENST00000540846 FAM110CQ1W6H9 321 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 INF2Q27J81 1249 aa14.13□□□□□ -0.15
SMAD3-204ENST00000540846 SLC30A10Q6XR72 485 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms