RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 LOC102724159A0A0B4J2E5 919 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 KLRF2D3W0D1 207 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 E7EWF7 191 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 SGSM2O43147 1006 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 NT5C2P49902 561 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
MSRB3-209ENST00000540804 PWP2Q15269 919 aaKnown RBP16.88■□□□□ 0.29
MSRB3-209ENST00000540804 LY6KQ17RY6 165 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 SEPT14Q6ZU15 432 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
MSRB3-209ENST00000540804 ALDH8A1Q9H2A2 487 aaPredicted RBP16.88■□□□□ 0.29
MSRB3-209ENST00000540804 CXXC1Q9P0U4 656 aaPredicted RBP16.88■□□□□ 0.29
MSRB3-209ENST00000540804 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 PALM3A6NDB9 673 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 DLL1O00548 723 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 CFBP00751 764 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 EIF2AK2P19525 551 aaKnown RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 DNAJB2P25686 324 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 CPT1AP50416 773 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 NBPF20Q3BBV1 942 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 FAM47CQ5HY64 1035 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 RASIP1Q5U651 963 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 CCDC62Q6P9F0 684 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 HOMER1Q86YM7 354 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 SCFD2Q8WU76 684 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 RMDN3Q96TC7 470 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 GPHNQ9NQX3 736 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 POLR3EQ9NVU0 708 aa16.87■□□□□ 0.29
MSRB3-209ENST00000540804 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
MSRB3-209ENST00000540804 ANTXR2P58335 489 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 TRDNQ13061 729 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 GRIN2CQ14957 1233 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 PIBF1Q8WXW3 757 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 MTMR8Q96EF0 704 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 PIGSQ96S52 555 aa16.86■□□□□ 0.29
MSRB3-209ENST00000540804 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
MSRB3-209ENST00000540804 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
MSRB3-209ENST00000540804 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
MSRB3-209ENST00000540804 A6NJR5 290 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 CYTH3O43739 400 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 SORBS3O60504 671 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
MSRB3-209ENST00000540804 ARHGAP1Q07960 439 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 TTLL4Q14679 1199 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 GRM4Q14833 912 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
MSRB3-209ENST00000540804 AFG1LQ8WV93 481 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 AMNQ9BXJ7 453 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 PBX4Q9BYU1 374 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
MSRB3-209ENST00000540804 NKRFO15226 690 aaKnown RBP eCLIP16.84■□□□□ 0.29
MSRB3-209ENST00000540804 FGBP02675 491 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 WTAPQ15007 396 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 STXBP2Q15833 593 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 PSRC1Q6PGN9 363 aaPredicted RBP16.84■□□□□ 0.29
MSRB3-209ENST00000540804 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
MSRB3-209ENST00000540804 NCOA7Q8NI08 942 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 IL31RAQ8NI17 732 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 MAP4K1Q92918 833 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 TIFAQ96CG3 184 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
MSRB3-209ENST00000540804 RBM8AQ9Y5S9 174 aaKnown RBP16.84■□□□□ 0.29
MSRB3-209ENST00000540804 B4DLN1 442 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 ZBTB5O15062 677 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 NR3C2P08235 984 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 MYCLP12524 364 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-209ENST00000540804 HSD17B4P51659 736 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 MRPL12P52815 198 aaKnown RBP16.83■□□□□ 0.28
MSRB3-209ENST00000540804 TROAPQ12815 778 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 MB21D2Q8IYB1 491 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-209ENST00000540804 UNC80Q8N2C7 3258 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 MAFAQ8NHW3 353 aaPredicted RBP16.83■□□□□ 0.28
MSRB3-209ENST00000540804 HERVK_113Q902F9 699 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 ZNF576Q9H609 170 aa16.83■□□□□ 0.28
MSRB3-209ENST00000540804 RGS20O76081 388 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 GH1P01241 217 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 MMP3P08254 477 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 FOSL2P15408 326 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 RABGGTBP53611 331 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 DEFB128Q7Z7B8 93 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
MSRB3-209ENST00000540804 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 KAT2BQ92831 832 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 GPKOWQ92917 476 aaPredicted RBP eCLIP16.82■□□□□ 0.28
MSRB3-209ENST00000540804 IWS1Q96ST2 819 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 PDCD2LQ9BRP1 358 aa16.82■□□□□ 0.28
MSRB3-209ENST00000540804 SEZ6LQ9BYH1 1024 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms