RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 HOXA7P31268 230 aaPredicted RBP9.41□□□□□ -0.9
C16orf62-212ENST00000540240 IRX3P78415 501 aaPredicted RBP9.41□□□□□ -0.9
C16orf62-212ENST00000540240 TFCP2Q12800 502 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 MTX1Q13505 466 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 LRIT3Q3SXY7 679 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 C7orf61Q8IZ16 206 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 TRMT2AQ8IZ69 625 aaKnown RBP9.41□□□□□ -0.9
C16orf62-212ENST00000540240 GPRC5AQ8NFJ5 357 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 SOCS4Q8WXH5 440 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 C11orf49Q9H6J7 331 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
C16orf62-212ENST00000540240 RAI14Q9P0K7 980 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 HMG20BQ9P0W2 317 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 LRP2BPQ9P2M1 347 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 NAGPAQ9UK23 515 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 OGDHLQ9ULD0 1010 aa9.41□□□□□ -0.9
C16orf62-212ENST00000540240 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
C16orf62-212ENST00000540240 C9orf172C9J069 976 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 ATP9BO43861 1147 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
C16orf62-212ENST00000540240 MAPK4P31152 587 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 BACE1P56817 501 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
C16orf62-212ENST00000540240 PDE3AQ14432 1141 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 CCDC84Q86UT8 332 aaPredicted RBP9.4□□□□□ -0.9
C16orf62-212ENST00000540240 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
C16orf62-212ENST00000540240 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 SIX5Q8N196 739 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 MEIS3Q99687 375 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
C16orf62-212ENST00000540240 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.4□□□□□ -0.9
C16orf62-212ENST00000540240 LOC285556D6RIA3 1793 aa9.4□□□□□ -0.91
C16orf62-212ENST00000540240 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 SOX1O00570 391 aaPredicted RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 CYP2B6P20813 491 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 MAP3K21Q5TCX8 1036 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 NAA16Q6N069 864 aaPredicted RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 ATF7IPQ6VMQ6 1270 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 TDHQ8IZJ6 230 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 DIS3LQ8TF46 1054 aaKnown RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 ZNF384Q8TF68 577 aa9.39□□□□□ -0.91
C16orf62-212ENST00000540240 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 DNAJB12Q9NXW2 375 aaKnown RBP9.39□□□□□ -0.91
C16orf62-212ENST00000540240 LGR5O75473 907 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 RGS2P41220 211 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 HERVK_113P62684 666 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 CCDC158Q5M9N0 1113 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 PSAPL1Q6NUJ1 521 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 METTL16Q86W50 562 aaKnown RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 CERS3Q8IU89 383 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 DEFB123Q8N688 67 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 TRIB2Q92519 343 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 P2RX7Q99572 595 aaKnown RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 GSX2Q9BZM3 304 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 GPR108Q9NPR9 543 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 ZMYND8Q9ULU4 1186 aaPredicted RBP9.38□□□□□ -0.91
C16orf62-212ENST00000540240 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
C16orf62-212ENST00000540240 RAD21O60216 631 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 GNAI2P04899 355 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 HLA-DOAP06340 250 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 GRNP28799 593 aaKnown RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 MCAMP43121 646 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 MAGEA10P43363 369 aaPredicted RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 CCNA1P78396 465 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 CACNB2Q08289 660 aaPredicted RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 RRP1BQ14684 758 aaKnown RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 PLEKHH3Q7Z736 793 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 DMRTC2Q8IXT2 367 aaPredicted RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 SH3RF3Q8TEJ3 882 aaPredicted RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 LENG1Q96BZ8 264 aaPredicted RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
C16orf62-212ENST00000540240 RBPJLQ9UBG7 517 aa9.37□□□□□ -0.91
C16orf62-212ENST00000540240 ATAD5Q96QE3 1844 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 MSCO60682 206 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 COL6A1P12109 1028 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 SYN1P17600 705 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
C16orf62-212ENST00000540240 USP14P54578 494 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 ERVK-24P63145 666 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 TTC39AQ5SRH9 613 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 TMED8Q6PL24 325 aaPredicted RBP9.36□□□□□ -0.91
C16orf62-212ENST00000540240 PI16Q6UXB8 463 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 USP6NLQ92738 828 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 EDC3Q96F86 508 aaKnown RBP9.36□□□□□ -0.91
C16orf62-212ENST00000540240 ZNF512BQ96KM6 892 aaPredicted RBP9.36□□□□□ -0.91
C16orf62-212ENST00000540240 APBA2Q99767 749 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 MTMR10Q9NXD2 777 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 AATFQ9NY61 560 aaKnown RBP eCLIP9.36□□□□□ -0.91
C16orf62-212ENST00000540240 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
C16orf62-212ENST00000540240 MKI67P46013 3256 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms