RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 DNAAF2Q9NVR5 837 aaKnown RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 GDAQ9Y2T3 454 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 RBMX2Q9Y388 322 aaKnown RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 NR5A1Q13285 461 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 TMED2Q15363 201 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 LNPEPQ9UIQ6 1025 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 LEMD3Q9Y2U8 911 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 SLC44A4Q53GD3 710 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
PBX1-212ENST00000540236 TAF1DQ9H5J8 278 aaPredicted RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 NVLO15381 856 aaKnown RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 NLRP6P59044 892 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 NCAPHQ15003 741 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 ASIC2Q16515 512 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 ST13P4Q8IZP2 240 aaPredicted RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 RAB17Q9H0T7 212 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 PSMC1P62191 440 aaKnown RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 HP1BP3Q5SSJ5 553 aaPredicted RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 RBM43Q6ZSC3 357 aaKnown RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 MIER3Q7Z3K6 550 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 DRC3Q9H069 523 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 ABCF3Q9NUQ8 709 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 POLR3EQ9NVU0 708 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 HAO1Q9UJM8 370 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 PNMA3Q9UL41 463 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 IVNS1ABPQ9Y6Y0 642 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 IL13P35225 146 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 RESP18Q5W5W9 173 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 U2AF1L4Q8WU68 220 aaKnown RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 DBF4Q9UBU7 674 aaPredicted RBP12.09□□□□□ -0.47
PBX1-212ENST00000540236 DAPK3O43293 454 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 C21orf2O43822 256 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 MYL1P05976 194 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 CUL4BQ13620 913 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 NR1I3Q14994 352 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 GALNT17Q6IS24 598 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 CCDC105Q8IYK2 499 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 FGFR1OP2Q9NVK5 253 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
PBX1-212ENST00000540236 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 KRT10P13645 584 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 PAGE5Q96GU1 130 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 SMYD3Q9H7B4 428 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 PALMDQ9NP74 551 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 AGPAT5Q9NUQ2 364 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 AHCYL1O43865 530 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 KRT15P19012 456 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 CACNA2D1P54289 1103 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 ANKRD20A2Q5SQ80 823 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ANKRD20A1Q5TYW2 823 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ANKRD20A3Q5VUR7 823 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 TRAPPC11Q7Z392 1133 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ENOX1Q8TC92 643 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 ZNF594Q96JF6 807 aaPredicted RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 TRIM51Q9BSJ1 452 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 MKNK1Q9BUB5 465 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ATP5JP18859 108 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ICA1Q05084 483 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 GRIN1Q05586 938 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 ENGASEQ8NFI3 743 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 KIFAP3Q92845 792 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 GSTT1P30711 240 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 MRPL12P52815 198 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 NELFCDQ8IXH7 590 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 PPP1R14CQ8TAE6 165 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 DDX17Q92841 729 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 DTNBP1Q96EV8 351 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 XAB2Q9HCS7 855 aaKnown RBP12.08□□□□□ -0.48
PBX1-212ENST00000540236 PTPRTO14522 1441 aa12.08□□□□□ -0.48
PBX1-212ENST00000540236 RAD51CO43502 376 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 FLOT1O75955 427 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 GJA8P48165 433 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 KIF11P52732 1056 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 WTAPQ15007 396 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 ACAP1Q15027 740 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 RCSD1Q6JBY9 416 aa12.07□□□□□ -0.48
PBX1-212ENST00000540236 TGS1Q96RS0 853 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 ALG13Q9NP73 1137 aaKnown RBP12.07□□□□□ -0.48
PBX1-212ENST00000540236 POC1B-GALNT4F8VUJ3 575 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms