RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 SLC5A4Q9NY91 659 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 MRPL11Q9Y3B7 192 aaKnown RBP8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 DOCK5Q9H7D0 1870 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 SYNGAP1Q96PV0 1343 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 STK36Q9NRP7 1315 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 STXBP3O00186 592 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 PRPF3O43395 683 aaKnown RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 PPFIA3O75145 1194 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 CD2BP2O95400 341 aaKnown RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 CYBAP13498 195 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 SCG2P13521 617 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 CALML3P27482 149 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 CYP2C19P33261 490 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 ALDH5A1P51649 535 aaPredicted RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 UBXN2AP68543 259 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 CACNB2Q08289 660 aaPredicted RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 BAATQ14032 418 aaPredicted RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 PKN1Q16512 942 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 PFKFB3Q16875 520 aaPredicted RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 TYW1BQ6NUM6 668 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 PPP1R18Q6NYC8 613 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 MAMDC4Q6UXC1 1216 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 HEATR3Q7Z4Q2 680 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 MCF2L2Q86YR7 1114 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 MSL3Q8N5Y2 521 aaKnown RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 TBC1D5Q92609 795 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 PURBQ96QR8 312 aaKnown RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 TINF2Q9BSI4 451 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 SLC26A6Q9BXS9 759 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 BARHL2Q9NY43 387 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 COL20A1Q9P218 1284 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 RBM27Q9P2N5 1060 aaKnown RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 LIMCH1Q9UPQ0 1083 aa8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 V9GY48 417 aaPredicted RBP8.05□□□□□ -1.12
LPCAT3-209ENST00000540060 FRMPD4Q14CM0 1322 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 LOC102724159A0A0B4J2E5 919 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 PIK3CDO00329 1044 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 CPLX1O14810 134 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 CDKL5O76039 1030 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 CTDNEP1O95476 244 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 CFBP00751 764 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 CCL5P13501 91 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 HOXB3P14651 431 aaPredicted RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 HOXA13P31271 388 aaPredicted RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 PWP2Q15269 919 aaKnown RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 MTFR1Q15390 333 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 MFSD14CQ5VZR4 134 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 ARMCX2Q7L311 632 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 TRIM22Q8IYM9 498 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 SAMD3Q8N6K7 520 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 NECAB1Q8N987 351 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 DNERQ8NFT8 737 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 SYTL5Q8TDW5 730 aaPredicted RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 MORC4Q8TE76 937 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 SHISA4Q96DD7 197 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 PAK6Q9NQU5 681 aaPredicted RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 MAP3K20Q9NYL2 800 aaKnown RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 BIN2Q9UBW5 565 aaPredicted RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 ADD3Q9UEY8 706 aaKnown RBP8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 DNAH12Q6ZR08 3092 aa8.04□□□□□ -1.12
LPCAT3-209ENST00000540060 RPTORQ8N122 1335 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 ALPK3Q96L96 1907 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 ESYT2A0FGR8 921 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 ASB14A6NK59 587 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 MEIS2O14770 477 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 DEXIO95424 95 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 SNAI1O95863 264 aaPredicted RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 POLR2MP0CAP2 368 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 EDNRBP24530 442 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 CCND3P30281 292 aaPredicted RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 NAPAP54920 295 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 CPLX2Q6PUV4 134 aaKnown RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 USP17L6PQ6QN14 398 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 NSUN7Q8NE18 718 aaKnown RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 TRPV1Q8NER1 839 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 ZSCAN31Q96LW9 406 aaPredicted RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 TAAR1Q96RJ0 339 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 KATNBL1Q9H079 304 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 PXMP2Q9NR77 195 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 SH2B1Q9NRF2 756 aaPredicted RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 NRBP1Q9UHY1 535 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 PCDHB13Q9Y5F0 798 aa8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 DDX49Q9Y6V7 483 aaKnown RBP8.03□□□□□ -1.12
LPCAT3-209ENST00000540060 MYH15Q9Y2K3 1946 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 DTNBO60941 627 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 MYCP01106 439 aaPredicted RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 FDPSP14324 419 aaKnown RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 CLK2P49760 499 aaKnown RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 ADCY7P51828 1080 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 AKAP17AQ02040 695 aaKnown RBP8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 UBE2SQ16763 222 aa8.02□□□□□ -1.13
LPCAT3-209ENST00000540060 TEX2Q8IWB9 1127 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms