RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 SLKQ9H2G2 1235 aaPredicted RBP15.47■□□□□ 0.07
PRPF19-204ENST00000539960 PXMP2Q9NR77 195 aa15.47■□□□□ 0.07
PRPF19-204ENST00000539960 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
PRPF19-204ENST00000539960 BARHL2Q9NY43 387 aa15.47■□□□□ 0.07
PRPF19-204ENST00000539960 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
PRPF19-204ENST00000539960 hCG_1984214I3L0E3 225 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 STXBP3O00186 592 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 CPLX1O14810 134 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 DUSP11O75319 330 aaKnown RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 NR3C2P08235 984 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 SCG2P13521 617 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 EIF2AK2P19525 551 aaKnown RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 TNFAIP2Q03169 654 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 STXBP2Q15833 593 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 FBXO16Q8IX29 292 aaPredicted RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 ZNF713Q8N859 430 aaPredicted RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 PAWRQ96IZ0 340 aaKnown RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 SLC26A6Q9BXS9 759 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 RNF26Q9BY78 433 aaPredicted RBP15.46■□□□□ 0.07
PRPF19-204ENST00000539960 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 XPNPEP3Q9NQH7 507 aa15.46■□□□□ 0.07
PRPF19-204ENST00000539960 RBBP6Q7Z6E9 1792 aaKnown RBP15.45■□□□□ 0.06
PRPF19-204ENST00000539960 RBM47A0AV96 593 aaKnown RBP15.45■□□□□ 0.06
PRPF19-204ENST00000539960 ADCY6O43306 1168 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 PPFIA3O75145 1194 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
PRPF19-204ENST00000539960 ADCYAP1R1P41586 468 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 NAPAP54920 295 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 SSRP1Q08945 709 aaKnown RBP15.45■□□□□ 0.06
PRPF19-204ENST00000539960 SCRN1Q12765 414 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 TYW1BQ6NUM6 668 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 PPP1R18Q6NYC8 613 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 NECAB2Q7Z6G3 386 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 VSIG10LQ86VR7 867 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 TEX2Q8IWB9 1127 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 PDCD2LQ9BRP1 358 aa15.45■□□□□ 0.06
PRPF19-204ENST00000539960 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.44■□□□□ 0.06
PRPF19-204ENST00000539960 SMCO2A6NFE2 343 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 PGK1P00558 417 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 SMPD1P17405 629 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 LRRC41Q15345 812 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 ME3Q16798 604 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
PRPF19-204ENST00000539960 TRIM22Q8IYM9 498 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 DIS3LQ8TF46 1054 aaKnown RBP15.44■□□□□ 0.06
PRPF19-204ENST00000539960 LENG1Q96BZ8 264 aaPredicted RBP15.44■□□□□ 0.06
PRPF19-204ENST00000539960 WDR11Q9BZH6 1224 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 RIC8AQ9NPQ8 531 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 GNEQ9Y223 722 aaKnown RBP15.44■□□□□ 0.06
PRPF19-204ENST00000539960 MYH6P13533 1939 aa15.44■□□□□ 0.06
PRPF19-204ENST00000539960 DNM1LO00429 736 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 PGM5Q15124 567 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 RABEP1Q15276 862 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 DUSP28Q4G0W2 176 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 TMEM63BQ5T3F8 832 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 GJC2Q5T442 439 aaPredicted RBP15.43■□□□□ 0.06
PRPF19-204ENST00000539960 RNF180Q86T96 592 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 TBC1D32Q96NH3 1257 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 GLT8D2Q9H1C3 349 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 SPC25Q9HBM1 224 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 LIMCH1Q9UPQ0 1083 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 Q9Y3F1 56 aa15.43■□□□□ 0.06
PRPF19-204ENST00000539960 DYNC1LI2O43237 492 aaPredicted RBP15.42■□□□□ 0.06
PRPF19-204ENST00000539960 ADAMTS4O75173 837 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 CDKL5O76039 1030 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
PRPF19-204ENST00000539960 COL6A1P12109 1028 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
PRPF19-204ENST00000539960 CCND2P30279 289 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 ADCY7P51828 1080 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 GJA9P57773 515 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 NKX3-2P78367 333 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 UBE2SQ16763 222 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 SEPT14Q6ZU15 432 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 NECAB1Q8N987 351 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 KLHDC9Q8NEP7 349 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 IL31RAQ8NI17 732 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 CCDC12Q8WUD4 166 aaPredicted RBP15.42■□□□□ 0.06
PRPF19-204ENST00000539960 TSEN34Q9BSV6 310 aaKnown RBP15.42■□□□□ 0.06
PRPF19-204ENST00000539960 ZMYND12Q9H0C1 365 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
PRPF19-204ENST00000539960 C11orf49Q9H6J7 331 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 SH3GLB2Q9NR46 395 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 SYNRGQ9UMZ2 1314 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 BRCA2P51587 3418 aa15.42■□□□□ 0.06
PRPF19-204ENST00000539960 LCTP09848 1927 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 ESYT2A0FGR8 921 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 KBTBD13C9JR72 458 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 DEXIO95424 95 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 LARGE1O95461 756 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 CTDNEP1O95476 244 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 FOSP01100 380 aaPredicted RBP15.41■□□□□ 0.06
PRPF19-204ENST00000539960 TXNP10599 105 aaKnown RBP15.41■□□□□ 0.06
PRPF19-204ENST00000539960 GNASQ5JWF2 1037 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
PRPF19-204ENST00000539960 CCDC62Q6P9F0 684 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms