RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 FANCCQ00597 558 aa19.28■□□□□ 0.68
LTBR-207ENST00000539925 HYIQ5T013 277 aa19.28■□□□□ 0.68
LTBR-207ENST00000539925 SV2BQ7L1I2 683 aa19.28■□□□□ 0.68
LTBR-207ENST00000539925 MTRQ99707 1265 aa19.28■□□□□ 0.68
LTBR-207ENST00000539925 RRAGDQ9NQL2 400 aaPredicted RBP19.28■□□□□ 0.68
LTBR-207ENST00000539925 RHOBTB3O94955 611 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 SERPINC1P01008 464 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 CUL4BQ13620 913 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
LTBR-207ENST00000539925 NOL9Q5SY16 702 aaKnown RBP19.27■□□□□ 0.68
LTBR-207ENST00000539925 HAUS3Q68CZ6 603 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 CNNM4Q6P4Q7 775 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 ERMNQ8TAM6 284 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 SNX29Q8TEQ0 813 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 HAS1Q92839 578 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 MMTAG2Q9BU76 263 aaKnown RBP19.27■□□□□ 0.68
LTBR-207ENST00000539925 MAF1Q9H063 256 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 NFE2L3Q9Y4A8 694 aa19.27■□□□□ 0.68
LTBR-207ENST00000539925 ATAD5Q96QE3 1844 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 UBASH3AP57075 661 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 SNAP25P60880 206 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 LDHDQ86WU2 507 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.67
LTBR-207ENST00000539925 GGA3Q9NZ52 723 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 IFNKQ9P0W0 207 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 RWDD2AQ9UIY3 292 aa19.27■□□□□ 0.67
LTBR-207ENST00000539925 SYNRGQ9UMZ2 1314 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 PVALEFA0A1B0GWK0 134 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 OPLAHO14841 1288 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 NRDCO43847 1150 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 ZNF18P17022 549 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 GHRHRQ02643 423 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 SPAG1Q07617 926 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 TMEM119Q4V9L6 283 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 CCDC174Q6PII3 467 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 CCDC186Q7Z3E2 898 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 ZNF280CQ8ND82 737 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 TRPM4Q8TD43 1214 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 CTAGE1Q96RT6 745 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 WRNIP1Q96S55 665 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 GLIS2Q9BZE0 524 aaPredicted RBP19.26■□□□□ 0.67
LTBR-207ENST00000539925 TRIM9Q9C026 710 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 HSD3B7Q9H2F3 369 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 BLZF1Q9H2G9 400 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 FANCLQ9NW38 375 aa19.26■□□□□ 0.67
LTBR-207ENST00000539925 CTDP1Q9Y5B0 961 aaPredicted RBP19.26■□□□□ 0.67
LTBR-207ENST00000539925 MYH7BA7E2Y1 1941 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 PPP1R3GB7ZBB8 358 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 CDK11BP21127 795 aaKnown RBP19.25■□□□□ 0.67
LTBR-207ENST00000539925 ZNF76P36508 570 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 BACE1P56817 501 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 PAK1Q13153 545 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 GRB10Q13322 594 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 COBLL1Q53SF7 1204 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 LARP4BQ92615 738 aaKnown RBP19.25■□□□□ 0.67
LTBR-207ENST00000539925 XPO4Q9C0E2 1151 aaKnown RBP19.25■□□□□ 0.67
LTBR-207ENST00000539925 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.25■□□□□ 0.67
LTBR-207ENST00000539925 CCPG1Q9ULG6 757 aa19.25■□□□□ 0.67
LTBR-207ENST00000539925 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
LTBR-207ENST00000539925 ZBED4O75132 1171 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 CFBP00751 764 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 INPP5BP32019 993 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 CCDC150Q8NCX0 1101 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 ANKRD20A12PQ8NF67 263 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 ETNPPLQ8TBG4 499 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 RAD54LQ92698 747 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 BMP2KQ9NSY1 1161 aaPredicted RBP19.24■□□□□ 0.67
LTBR-207ENST00000539925 EXOC1Q9NV70 894 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 PPP1R9AQ9ULJ8 1098 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 PSMA7O14818 248 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 PTPRAP18433 802 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 EPS15P42566 896 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 SETQ01105 290 aaPredicted RBP19.24■□□□□ 0.67
LTBR-207ENST00000539925 FMR1Q06787 632 aaKnown RBP eCLIP19.24■□□□□ 0.67
LTBR-207ENST00000539925 TPD52L1Q16890 204 aaPredicted RBP19.24■□□□□ 0.67
LTBR-207ENST00000539925 PRR16Q569H4 304 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 STAMQ92783 540 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 TANGO6Q9C0B7 1094 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 SLC38A10Q9HBR0 1119 aa19.24■□□□□ 0.67
LTBR-207ENST00000539925 VCAM1P19320 739 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 PTGS1P23219 599 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 HSD17B4P51659 736 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 MTMR2Q13614 643 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 KMT5BQ4FZB7 885 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 GIMAP8Q8ND71 665 aaPredicted RBP19.23■□□□□ 0.67
LTBR-207ENST00000539925 RBM46Q8TBY0 533 aaKnown RBP19.23■□□□□ 0.67
LTBR-207ENST00000539925 NOC3LQ8WTT2 800 aaKnown RBP19.23■□□□□ 0.67
LTBR-207ENST00000539925 DHTKD1Q96HY7 919 aaPredicted RBP19.23■□□□□ 0.67
LTBR-207ENST00000539925 SYT17Q9BSW7 474 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 RNF181Q9P0P0 153 aa19.23■□□□□ 0.67
LTBR-207ENST00000539925 POTEMA6NI47 508 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 KLRC4O43908 158 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 FLOT1O75955 427 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 CASP1P29466 404 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 CCT6AP40227 531 aaKnown RBP19.22■□□□□ 0.67
LTBR-207ENST00000539925 OAZ1P54368 228 aa19.22■□□□□ 0.67
LTBR-207ENST00000539925 ASIC1P78348 528 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms