RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	PCDHB4	Q9Y5E5	795 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ORC6	Q9Y5N6	252 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	HIP1R	O75146	1068 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	TTLL1	O95922	423 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	HSPD1	P10809	573 aa	Known RBP	9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ABCB4	P21439	1286 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	COPB1	P53618	953 aa	Known RBP	9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ADK	P55263	362 aa	Known RBP	9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	CHRND	Q07001	517 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	MMEL1	Q495T6	779 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	EFCAB13	Q8IY85	973 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	NLRP7	Q8WX94	980 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	HDAC11	Q96DB2	347 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	NACC1	Q96RE7	527 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	AP5M1	Q9H0R1	490 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	EFCC1	Q9HA90	598 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.8	□□□□□ -0.84	4e-7	■□□□□ 10.6
ECHDC2-222	ENST00000539680	DIS3	Q9Y2L1	958 aa	Known RBP	9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PTPRT	O14522	1441 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	KDM5C	P41229	1560 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	HSP90AA5P	Q58FG0	334 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SULF1	Q8IWU6	871 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SYMPK	Q92797	1274 aa	Known RBP	9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PBK	Q96KB5	322 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	RNF26	Q9BY78	433 aa	Predicted RBP	9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	RABEP2	Q9H5N1	569 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ANGPTL3	Q9Y5C1	460 aa		9.8	□□□□□ -0.84
ECHDC2-222	ENST00000539680		H7C0C1	242 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	NFKBIA	P25963	317 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ATP5O	P48047	213 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	GUCY2F	P51841	1108 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	RDH13	Q8NBN7	331 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	POMGNT1	Q8WZA1	660 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ATG3	Q9NT62	314 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	UNC13A	Q9UPW8	1703 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF804B	A4D1E1	1349 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	MYO5C	Q9NQX4	1742 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SART1	O43290	800 aa	Known RBP	9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ECM2	O94769	699 aa	Predicted RBP	9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	INHBA	P08476	426 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	NLGN1	Q8N2Q7	840 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	MRPL47	Q9HD33	250 aa	Known RBP	9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	TCP10L2	B9ZVM9	353 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SEC24B	O95487	1268 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	POLA2	Q14181	598 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	CNOT6L	Q96LI5	555 aa	Known RBP	9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF577	Q9BSK1	485 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SEPT9	Q9UHD8	586 aa	Predicted RBP	9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	LRFN2	Q9ULH4	789 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	YEATS2	Q9ULM3	1422 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	INPP1	P49441	399 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF658	Q5TYW1	1059 aa	Predicted RBP	9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ARMC9	Q7Z3E5	817 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	THAP9	Q9H5L6	903 aa		9.79	□□□□□ -0.84
ECHDC2-222	ENST00000539680	TMEM232	C9JQI7	657 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SUN1	O94901	812 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PPARG	P37231	505 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	LRCH2	Q5VUJ6	765 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	LARP4B	Q92615	738 aa	Known RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	TRIM15	Q9C019	465 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	CNOT10	Q9H9A5	744 aa	Known RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	IKBKB	O14920	756 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	XPA	P23025	273 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	RFC1	P35251	1148 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	IFRD2	Q12894	506 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PRKG1	Q13976	671 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	LRRC8A	Q8IWT6	810 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	CCDC124	Q96CT7	223 aa	Known RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF215	Q9UL58	517 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	LRRIQ4	A6NIV6	560 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PER1	O15534	1290 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	BUB1	O43683	1085 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF189	O75820	626 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ILDR1	Q86SU0	546 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	DHX36	Q9H2U1	1008 aa	Known RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF148	Q9UQR1	794 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	STK38L	Q9Y2H1	464 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	IFNB1	P01574	187 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ERCC3	P19447	782 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SUPT20HL1	Q3ZLR7	823 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	LRRC47	Q8N1G4	583 aa	Known RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PPM1K	Q8N3J5	372 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ZNF496	Q96IT1	587 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	MCF2L	O15068	1137 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	CP	P00450	1065 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	EPHB4	P54760	987 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	MYO1E	Q12965	1108 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PPP4R3CP	Q6ZMV5	832 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PSMB7	Q99436	277 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	EIF2A	Q9BY44	585 aa	Known RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	TSPYL2	Q9H2G4	693 aa	Predicted RBP	9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	KMT5A	Q9NQR1	393 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SH3GLB2	Q9NR46	395 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SLC8A2	Q9UPR5	921 aa		9.78	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SGK1	O00141	431 aa		9.77	□□□□□ -0.84
ECHDC2-222	ENST00000539680	DLAT	P10515	647 aa	Known RBP	9.77	□□□□□ -0.84
ECHDC2-222	ENST00000539680	ANXA13	P27216	316 aa		9.77	□□□□□ -0.84
ECHDC2-222	ENST00000539680	SNCB	Q16143	134 aa		9.77	□□□□□ -0.84
ECHDC2-222	ENST00000539680	PDCD2	Q16342	344 aa	Predicted RBP	9.77	□□□□□ -0.84
ECHDC2-222	ENST00000539680	KRT39	Q6A163	491 aa		9.77	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms