RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MTMR9Q96QG7 549 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 EMILIN3Q9NT22 766 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 HOXA13P31271 388 aaPredicted RBP19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 TECP42680 631 aa19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 AFMP43652 599 aa19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 ORC2Q13416 577 aaPredicted RBP19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 KARSQ15046 597 aaKnown RBP19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 E2F4Q16254 413 aa19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 KANK3Q6NY19 840 aa19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 LPAR1Q92633 364 aa19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 PICK1Q9NRD5 415 aa19.23■□□□□ 0.67
PCDHB17P-201ENST00000539533 WDR46O15213 610 aaKnown RBP19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 TXKP42681 527 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 GPR162Q16538 588 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 CALCRLQ16602 461 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 PPP4R3AQ6IN85 833 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 ZNF397Q8NF99 534 aaPredicted RBP19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 STAMQ92783 540 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 PAGE5Q96GU1 130 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 IMPACTQ9P2X3 320 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 DOCK1Q14185 1865 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 CASP1P29466 404 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 SUPT20HL1Q3ZLR7 823 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 IQUBQ8NA54 791 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 ERO1AQ96HE7 468 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 ZHX2Q9Y6X8 837 aa19.22■□□□□ 0.67
PCDHB17P-201ENST00000539533 ADM5C9JUS6 153 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 DPY19L2Q6NUT2 758 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 SH3RF1Q7Z6J0 888 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 DCPSQ96C86 337 aaKnown RBP19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 WDR18Q9BV38 432 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 DDX25Q9UHL0 483 aaKnown RBP19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 V9GYY5 206 aaPredicted RBP19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 KIF2AO00139 706 aaPredicted RBP19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 VCAM1P19320 739 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 TXLNAP40222 546 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 UBA7P41226 1012 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 BACE1P56817 501 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 AP3B2Q13367 1082 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 KMT5BQ4FZB7 885 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 ZNF280CQ8ND82 737 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 BPIFA3Q9BQP9 254 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 TANGO6Q9C0B7 1094 aa19.21■□□□□ 0.67
PCDHB17P-201ENST00000539533 USP2O75604 605 aaPredicted RBP19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 BMP6P22004 513 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 SARSP49591 514 aaKnown RBP19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 PDXDC2PQ6P474 469 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 LDHDQ86WU2 507 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 PRPF38AQ8NAV1 312 aaKnown RBP19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 GJA10Q969M2 543 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 PLIN2Q99541 437 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 CFBP00751 764 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 NT5DC1Q5TFE4 455 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 SULF1Q8IWU6 871 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 CRYGNQ8WXF5 182 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 SMARCE1Q969G3 411 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 AGBL1Q96MI9 1066 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 UIMC1Q96RL1 719 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 MAN1B1Q9UKM7 699 aa19.2■□□□□ 0.66
PCDHB17P-201ENST00000539533 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 USP11P51784 963 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 IGSF22Q8N9C0 903 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 MTRQ99707 1265 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 CCSER1Q9C0I3 900 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 RPAP3Q9H6T3 665 aaPredicted RBP19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 AS3MTQ9HBK9 375 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 DISC1Q9NRI5 854 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 ZNF536O15090 1300 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 PIK3CDO00329 1044 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 FLOT1O75955 427 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 SMC2O95347 1197 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 SLU7O95391 586 aaKnown RBP19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 USP14P54578 494 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 ARHGAP4P98171 946 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 TRAF1Q13077 416 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 NAALADL2Q58DX5 795 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 FCHSD1Q86WN1 690 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 CCDC150Q8NCX0 1101 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 SPATA20Q8TB22 786 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 HAS1Q92839 578 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 AK8Q96MA6 479 aa19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 XPO4Q9C0E2 1151 aaKnown RBP19.19■□□□□ 0.66
PCDHB17P-201ENST00000539533 FOSP01100 380 aaPredicted RBP19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 STAT6P42226 847 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 ELF2Q15723 593 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 E4F1Q66K89 784 aaPredicted RBP19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 CABP7Q86V35 215 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 TMEM51Q9NW97 253 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 IFNKQ9P0W0 207 aa19.18■□□□□ 0.66
PCDHB17P-201ENST00000539533 GCFC2P16383 781 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms