RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 PDGFRBP09619 1106 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 CD8BP10966 210 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 PYGMP11217 842 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 FPR2P25090 351 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 ITGB7P26010 798 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 PRKCQQ04759 706 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 KCNAB2Q13303 367 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 IKZF1Q13422 519 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 CPSF6Q16630 551 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 CFAP100Q494V2 611 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 BRDTQ58F21 947 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 RSPO2Q6UXX9 243 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 SPRED2Q7Z698 418 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 SLC51AQ86UW1 340 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 PPM1KQ8N3J5 372 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 CISD2Q8N5K1 135 aaKnown RBP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 ATL2Q8NHH9 583 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 CHAMP1Q96JM3 812 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 JMJD8Q96S16 334 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 KCNJ15Q99712 375 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 ADAMTS10Q9H324 1103 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 GULP1Q9UBP9 304 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 G3BP2Q9UN86 482 aaKnown RBP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 TRAF5O00463 557 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 NEMP1O14524 444 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 KCNK3O14649 394 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 KATNA1O75449 491 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 DNM2P50570 870 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 FSTL4Q6MZW2 842 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 NFXL1Q6ZNB6 911 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 DDX46Q7L014 1031 aaKnown RBP4.37□□□□□ -1.71
SNHG1-210ENST00000539303 FERMT3Q86UX7 667 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 TEX2Q8IWB9 1127 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 RAVER1Q8IY67 606 aaKnown RBP4.37□□□□□ -1.71
SNHG1-210ENST00000539303 BCL7CQ8WUZ0 217 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-210ENST00000539303 ASB11Q8WXH4 323 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 HHIPL1Q96JK4 782 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 FCRL2Q96LA5 508 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-210ENST00000539303 ZFYVE21Q9BQ24 234 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 JAM3Q9BX67 310 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 IRF2BPLQ9H1B7 796 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 HOMER2Q9NSB8 354 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 H2AFY2Q9P0M6 372 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-210ENST00000539303 RWDD3Q9Y3V2 267 aa4.37□□□□□ -1.71
SNHG1-210ENST00000539303 CCDC66A2RUB6 948 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 FADS2P1A8MWK0 482 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 CBX4O00257 560 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 TBC1D8O95759 1140 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 ZGLP1P0C6A0 271 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 MSL3P1P0C860 447 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 GRK2P25098 689 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 GRK3P35626 688 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 GALK1P51570 392 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 TMPRSS15P98073 1019 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 DSG1Q02413 1049 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 PAK1Q13153 545 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 STAT4Q14765 748 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 KIZQ2M2Z5 673 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 TMEM177Q53S58 311 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 IQCEQ6IPM2 695 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 CYP2R1Q6VVX0 501 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 OVCH1Q7RTY7 1134 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 SLCO6A1Q86UG4 719 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 AHI1Q8N157 1196 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 COG1Q8WTW3 980 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 WNK4Q96J92 1243 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 MAP6Q96JE9 813 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 TRIM8Q9BZR9 551 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 CCDC8Q9H0W5 538 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-210ENST00000539303 SEMA6BQ9H3T3 888 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 CRTAC1Q9NQ79 661 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 CLDND1Q9NY35 253 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 MARCH2Q9P0N8 246 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 SLAMF8Q9P0V8 285 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 VAV3Q9UKW4 847 aa4.36□□□□□ -1.71
SNHG1-210ENST00000539303 TIMM13Q9Y5L4 95 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-210ENST00000539303 TCRBV5S4A2TA0A5A2 114 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 WTIPA6NIX2 430 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 NOTOA8MTQ0 251 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 MARCH6O60337 910 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 PARNO95453 639 aaKnown RBP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 FUCA1P04066 466 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 COL6A2P12110 1019 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 YBX3P16989 372 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 TACR1P25103 407 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 ADCYAP1R1P41586 468 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 MECP2P51608 486 aaKnown RBP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 GUCY2FP51841 1108 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 ERVFC1P60507 584 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 RPL11P62913 178 aaKnown RBP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 ZP2Q05996 745 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 LSAMPQ13449 338 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 DHCR24Q15392 516 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 UBE2R2Q712K3 238 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 DDX53Q86TM3 631 aaKnown RBP4.35□□□□□ -1.71
SNHG1-210ENST00000539303 PI4K2BQ8TCG2 481 aa4.35□□□□□ -1.71
SNHG1-210ENST00000539303 LINC01599Q8WXQ3 324 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms