RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 PRKCAP17252 672 aa7.53□□□□□ -1.2
SSPN-206ENST00000539019 GIPRP48546 466 aa7.53□□□□□ -1.2
SSPN-206ENST00000539019 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
SSPN-206ENST00000539019 FHOD1Q9Y613 1164 aa7.53□□□□□ -1.2
SSPN-206ENST00000539019 PTPRTO14522 1441 aa7.53□□□□□ -1.2
SSPN-206ENST00000539019 ARID4BQ4LE39 1312 aaPredicted RBP7.52□□□□□ -1.21
SSPN-206ENST00000539019 ERVFRD-1P60508 538 aa7.52□□□□□ -1.21
SSPN-206ENST00000539019 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.21
SSPN-206ENST00000539019 FIBCD1Q8N539 461 aa7.52□□□□□ -1.21
SSPN-206ENST00000539019 JMJD8Q96S16 334 aa7.52□□□□□ -1.21
SSPN-206ENST00000539019 SRRTQ9BXP5 876 aaKnown RBP7.52□□□□□ -1.21
SSPN-206ENST00000539019 ACSL6Q9UKU0 697 aa7.52□□□□□ -1.21
SSPN-206ENST00000539019 GCC2Q8IWJ2 1684 aa7.52□□□□□ -1.21
SSPN-206ENST00000539019 A0A1W2PQH9 124 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 CBFA2T2O43439 604 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 NUAK1O60285 661 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 ITGA4P13612 1032 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 VIPR1P32241 457 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 NOP2P46087 812 aaKnown RBP7.51□□□□□ -1.21
SSPN-206ENST00000539019 GJA8P48165 433 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 CYP4F8P98187 520 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 LAPTM5Q13571 262 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 TCEAL1Q15170 157 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 RGS22Q8NE09 1264 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 NUP43Q8NFH3 380 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 FCRL3Q96P31 734 aaPredicted RBP7.51□□□□□ -1.21
SSPN-206ENST00000539019 IRF2BPLQ9H1B7 796 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 NOL6Q9H6R4 1146 aaKnown RBP7.51□□□□□ -1.21
SSPN-206ENST00000539019 SIRT5Q9NXA8 310 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 MBD1Q9UIS9 605 aaPredicted RBP7.51□□□□□ -1.21
SSPN-206ENST00000539019 PCDHB10Q9UN67 800 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 NUP155O75694 1391 aa7.51□□□□□ -1.21
SSPN-206ENST00000539019 WASHC2CQ9Y4E1 1318 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 HRKO00198 91 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 MPOP05164 745 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 NASPP49321 788 aaPredicted RBP7.5□□□□□ -1.21
SSPN-206ENST00000539019 YBX1P67809 324 aaKnown RBP7.5□□□□□ -1.21
SSPN-206ENST00000539019 LCE4AQ5TA78 99 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 HLA-DQA1Q5Y7H0 255 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 NAT16Q8N8M0 369 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 OR6P1Q8NGX9 317 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 KLHL14Q9P2G3 628 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 IMPACTQ9P2X3 320 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 CNOT6Q9ULM6 557 aaKnown RBP7.5□□□□□ -1.21
SSPN-206ENST00000539019 SF3B6Q9Y3B4 125 aaKnown RBP7.5□□□□□ -1.21
SSPN-206ENST00000539019 SLC12A7Q9Y666 1083 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 IQGAP3Q86VI3 1631 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 SPATA31D1Q6ZQQ2 1576 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 EFCAB6Q5THR3 1501 aa7.5□□□□□ -1.21
SSPN-206ENST00000539019 ERVK-7P63135 1459 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 A0A087WZG4 1122 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 FGF10O15520 208 aaPredicted RBP7.49□□□□□ -1.21
SSPN-206ENST00000539019 ARL4AP40617 200 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 PPP2R5DQ14738 602 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 SHDQ96IW2 340 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 ZDHHC15Q96MV8 337 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 HAUS7Q99871 368 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 ACBD3Q9H3P7 528 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 CNTD2Q9H8S5 307 aa7.49□□□□□ -1.21
SSPN-206ENST00000539019 DIS3Q9Y2L1 958 aaKnown RBP7.49□□□□□ -1.21
SSPN-206ENST00000539019 IFNGR1P15260 489 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 POU4F1Q01851 419 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 MVKQ03426 396 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 PPP2R5EQ16537 467 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 C19orf47Q8N9M1 422 aaKnown RBP7.48□□□□□ -1.21
SSPN-206ENST00000539019 MPHOSPH9Q99550 1183 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 PHAXQ9H814 394 aaKnown RBP7.48□□□□□ -1.21
SSPN-206ENST00000539019 KCTD3Q9Y597 815 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 MROH2AA6NES4 1674 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 RPRD2Q5VT52 1461 aaKnown RBP7.48□□□□□ -1.21
SSPN-206ENST00000539019 LMTK3Q96Q04 1460 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 SYNMO15061 1565 aa7.48□□□□□ -1.21
SSPN-206ENST00000539019 C3P01024 1663 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 ABLIM1O14639 778 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 CD3EP07766 207 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 MSL3P1P0C860 447 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 EPHB3P54753 998 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 SLC7A5Q01650 507 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 SSPNQ14714 243 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 RAB3GAP1Q15042 981 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 HEATR6Q6AI08 1181 aaKnown RBP7.47□□□□□ -1.21
SSPN-206ENST00000539019 ADCY4Q8NFM4 1077 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 CPLX3Q8WVH0 158 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 TGIF2Q9GZN2 237 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 WHRNQ9P202 907 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 ANKRD30BQ9BXX2 1392 aa7.47□□□□□ -1.21
SSPN-206ENST00000539019 CLTCQ00610 1675 aaKnown RBP7.47□□□□□ -1.21
SSPN-206ENST00000539019 RIMS1Q86UR5 1692 aaKnown RBP7.47□□□□□ -1.21
SSPN-206ENST00000539019 A0A1W2PQ27 194 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 A0A1W2PQ64 194 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 A0A1W2PQC6 194 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 A0A1W2PQD8 194 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 NUDT19A8MXV4 375 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 IDI1Q13907 227 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.21
SSPN-206ENST00000539019 JAMLQ86YT9 394 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 KLHL6Q8WZ60 621 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms