RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 STK17AQ9UEE5 414 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 REXO2Q9Y3B8 237 aaKnown RBP27.82■■■□□ 2.04
RAB40C-204ENST00000538492 ZBTB5O15062 677 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 TFRCP02786 760 aaKnown RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 DMTNQ08495 405 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 GPATCH4Q5T3I0 446 aaKnown RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 KCNK18Q7Z418 384 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 ZNF622Q969S3 477 aaKnown RBP eCLIP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 NOC4LQ9BVI4 516 aaKnown RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 TRIM10Q9UDY6 481 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 MYO3BQ8WXR4 1341 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 MMP10P09238 476 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 TSR1Q2NL82 804 aaKnown RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 KRT79Q5XKE5 535 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 GPR161Q8N6U8 529 aaKnown RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 GOLGA1Q92805 767 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 PCMTD1Q96MG8 357 aaPredicted RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 DDX25Q9UHL0 483 aaKnown RBP27.81■■■□□ 2.04
RAB40C-204ENST00000538492 CDC23Q9UJX2 597 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 MYH7BA7E2Y1 1941 aa27.81■■■□□ 2.04
RAB40C-204ENST00000538492 IDEP14735 1019 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 CLK2P49760 499 aaKnown RBP27.8■■■□□ 2.04
RAB40C-204ENST00000538492 PPP1R18Q6NYC8 613 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 PSTPIP2Q9H939 334 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 PDIA5Q14554 519 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 MIIPQ5JXC2 388 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 FAM114A1Q8IWE2 563 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 TFR2Q9UP52 801 aa27.8■■■□□ 2.04
RAB40C-204ENST00000538492 RASSF10A6NK89 507 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 PNMA6AP0CW24 399 aaPredicted RBP27.79■■■□□ 2.04
RAB40C-204ENST00000538492 PDE6BP35913 854 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 MSL1Q68DK7 614 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 UNC13DQ70J99 1090 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 RAD54LQ92698 747 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 ST7Q9NRC1 585 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 GUCA1BQ9UMX6 200 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 COL11A2P13942 1736 aaPredicted RBP27.79■■■□□ 2.04
RAB40C-204ENST00000538492 RBM5P52756 815 aaKnown RBP eCLIP27.79■■■□□ 2.04
RAB40C-204ENST00000538492 MRPL12P52815 198 aaKnown RBP27.79■■■□□ 2.04
RAB40C-204ENST00000538492 CHMP4BP1P59074 171 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 HAS1Q92839 578 aa27.79■■■□□ 2.04
RAB40C-204ENST00000538492 MARCH6O60337 910 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 ZRANB2O95218 330 aaKnown RBP eCLIP27.78■■■□□ 2.042e-6■■■□□ 16.1
RAB40C-204ENST00000538492 PPP1R2P41236 205 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 ECM1Q16610 540 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 PPP4R3AQ6IN85 833 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 SRGAP1Q7Z6B7 1085 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 PARD6BQ9BYG5 372 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 TTYH3Q9C0H2 523 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 RABGGTAQ92696 567 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 MASTLQ96GX5 879 aa27.78■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L15C9J2P7 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L13C9JLJ4 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L11C9JVI0 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L18D6R9N7 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L22D6RA61 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L17D6RBQ6 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L19D6RCP7 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L20D6RJB6 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L24Q0WX57 530 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 CENPPQ6IPU0 288 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 USP17L6PQ6QN14 398 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 DDX12PQ92771 950 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 NAPGQ99747 312 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-204ENST00000538492 ZNF219Q9P2Y4 722 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-204ENST00000538492 NRXN2Q9P2S2 1712 aa27.77■■■□□ 2.04
RAB40C-204ENST00000538492 GREB1LQ9C091 1923 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-204ENST00000538492 DDTLA6NHG4 134 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-204ENST00000538492 ZSCAN29Q8IWY8 852 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-204ENST00000538492 PVALEFA0A1B0GWK0 134 aa27.76■■■□□ 2.03
RAB40C-204ENST00000538492 EEF2P13639 858 aaKnown RBP27.76■■■□□ 2.03
RAB40C-204ENST00000538492 GLIS3Q8NEA6 775 aa27.76■■■□□ 2.03
RAB40C-204ENST00000538492 GTPBP4Q9BZE4 634 aaKnown RBP27.76■■■□□ 2.03
RAB40C-204ENST00000538492 ERCC3P19447 782 aa27.76■■■□□ 2.03
RAB40C-204ENST00000538492 COBLL1Q53SF7 1204 aa27.76■■■□□ 2.03
RAB40C-204ENST00000538492 ZDHHC15Q96MV8 337 aa27.76■■■□□ 2.03
RAB40C-204ENST00000538492 LRRC41Q15345 812 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 QRICH1Q2TAL8 776 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 MTMR8Q96EF0 704 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 CCDC17Q96LX7 622 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 EHD4Q9H223 541 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 SLC1A4P43007 532 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 HERVK_113P62684 666 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 PODNQ7Z5L7 613 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 PCDHA12Q9UN75 941 aa27.75■■■□□ 2.03
RAB40C-204ENST00000538492 CERKLQ49MI3 558 aaPredicted RBP27.74■■■□□ 2.03
RAB40C-204ENST00000538492 TMEM119Q4V9L6 283 aa27.74■■■□□ 2.03
RAB40C-204ENST00000538492 NUP58Q9BVL2 599 aa27.74■■■□□ 2.03
RAB40C-204ENST00000538492 MYO1AQ9UBC5 1043 aa27.74■■■□□ 2.03
RAB40C-204ENST00000538492 CC2D1AQ6P1N0 951 aaPredicted RBP27.74■■■□□ 2.03
RAB40C-204ENST00000538492 CEP112Q8N8E3 955 aa27.74■■■□□ 2.03
RAB40C-204ENST00000538492 AKT1S1Q96B36 256 aa27.74■■■□□ 2.03
RAB40C-204ENST00000538492 PCDHA1Q9Y5I3 950 aa27.74■■■□□ 2.03
RAB40C-204ENST00000538492 C10orf71Q711Q0 1435 aa27.73■■■□□ 2.03
RAB40C-204ENST00000538492 MEA1Q16626 185 aa27.73■■■□□ 2.03
RAB40C-204ENST00000538492 FKBP15Q5T1M5 1219 aa27.73■■■□□ 2.03
RAB40C-204ENST00000538492 FAM198AQ9UFP1 575 aa27.73■■■□□ 2.03
RAB40C-204ENST00000538492 SSBP05455 408 aaKnown RBP eCLIP27.73■■■□□ 2.03
RAB40C-204ENST00000538492 ZBED6P86452 979 aa27.73■■■□□ 2.03
RAB40C-204ENST00000538492 RETREG2Q8NC44 543 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms