RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 THG1LQ9NWX6 298 aaKnown RBP11.23□□□□□ -0.61
CD9-207ENST00000538418 GFOD1Q9NXC2 390 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 GMPR2Q9P2T1 348 aaKnown RBP11.23□□□□□ -0.61
CD9-207ENST00000538418 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
CD9-207ENST00000538418 WDR64B1ANS9 1081 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
CD9-207ENST00000538418 GPR85P60893 370 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 PICALMQ13492 652 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 SNW1Q13573 536 aaKnown RBP11.22□□□□□ -0.61
CD9-207ENST00000538418 PCBP2Q15366 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD9-207ENST00000538418 DPY19L1Q2PZI1 675 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 LETMD1Q6P1Q0 360 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
CD9-207ENST00000538418 CDH24Q86UP0 819 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 PPIL6Q8IXY8 311 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
CD9-207ENST00000538418 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 CLIP3Q96DZ5 547 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 MIPEPQ99797 713 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 B4GALT6Q9UBX8 382 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 PCOLCE2Q9UKZ9 415 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 INTUQ9ULD6 942 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
CD9-207ENST00000538418 NEO1Q92859 1461 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 CYP2C19P33261 490 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 GRIK1P39086 918 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 ETV3P41162 512 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 NEK3P51956 506 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 CHSY3Q70JA7 882 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 CHTF18Q8WVB6 975 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 E2F7Q96AV8 911 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 RNF208Q9H0X6 261 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 TAGLN3Q9UI15 199 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 RCAN3Q9UKA8 241 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 COQ6Q9Y2Z9 468 aa11.21□□□□□ -0.61
CD9-207ENST00000538418 WASHC2AQ641Q2 1341 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.2□□□□□ -0.62
CD9-207ENST00000538418 WISP1O95388 367 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 CKMP06732 381 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 DRD2P14416 443 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 NID1P14543 1247 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
CD9-207ENST00000538418 GTF2H3Q13889 308 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 GBX1Q14549 363 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
CD9-207ENST00000538418 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 DTWD1Q8N5C7 304 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
CD9-207ENST00000538418 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.2□□□□□ -0.62
CD9-207ENST00000538418 FAXDC2Q96IV6 333 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 GNL3LQ9NVN8 582 aaKnown RBP11.2□□□□□ -0.62
CD9-207ENST00000538418 NPFFR2Q9Y5X5 522 aa11.2□□□□□ -0.62
CD9-207ENST00000538418 ATP2A2P16615 1042 aaKnown RBP11.19□□□□□ -0.62
CD9-207ENST00000538418 SESN3P58005 492 aa11.19□□□□□ -0.62
CD9-207ENST00000538418 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
CD9-207ENST00000538418 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
CD9-207ENST00000538418 EPM2AIP1Q7L775 607 aaPredicted RBP11.19□□□□□ -0.62
CD9-207ENST00000538418 CHST14Q8NCH0 376 aa11.19□□□□□ -0.62
CD9-207ENST00000538418 COPS5Q92905 334 aa11.19□□□□□ -0.62
CD9-207ENST00000538418 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
CD9-207ENST00000538418 GPR27Q9NS67 375 aa11.19□□□□□ -0.62
CD9-207ENST00000538418 FAM105AQ9NUU6 356 aa11.19□□□□□ -0.62
CD9-207ENST00000538418 ERC2O15083 957 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 CFBP00751 764 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 THBDP07204 575 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 TMEM177Q53S58 311 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
CD9-207ENST00000538418 CLRN3Q8NCR9 226 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 RNF112Q9ULX5 631 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 ST14Q9Y5Y6 855 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 ACTL7BQ9Y614 415 aa11.18□□□□□ -0.62
CD9-207ENST00000538418 ANO9A1A5B4 782 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 H0Y8X5 98 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 SLITRK5O94991 958 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 TIAF1O95411 115 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 LTFP02788 710 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 RBP3P10745 1247 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 PHKG2P15735 406 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 LPOP22079 712 aaPredicted RBP11.17□□□□□ -0.62
CD9-207ENST00000538418 KRT85P78386 507 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 POU4F1Q01851 419 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 COL9A3Q14050 684 aaPredicted RBP11.17□□□□□ -0.62
CD9-207ENST00000538418 GRAMD1BQ3KR37 738 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 PGM2L1Q6PCE3 622 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 GPR161Q8N6U8 529 aaKnown RBP11.17□□□□□ -0.62
CD9-207ENST00000538418 PCDH19Q8TAB3 1148 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 FRS2Q8WU20 508 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 MCMBPQ9BTE3 642 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 ANLNQ9NQW6 1124 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 C14orf119Q9NWQ9 140 aa11.17□□□□□ -0.62
CD9-207ENST00000538418 MEFVO15553 781 aaPredicted RBP11.16□□□□□ -0.62
CD9-207ENST00000538418 WDHD1O75717 1129 aaPredicted RBP11.16□□□□□ -0.62
CD9-207ENST00000538418 HTR3AP46098 478 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 MECP2P51608 486 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms