RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ERVK-24P63145 666 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MOGSQ13724 837 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SHISA4Q96DD7 197 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PCDHB6Q9Y5E3 794 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PFASO15067 1338 aa12.11□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MEIS2O14770 477 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 USP11P51784 963 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CLCN6P51797 869 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RPS6P62753 249 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 UBXN2AP68543 259 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SLC39A14Q15043 492 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NPY5RQ15761 445 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NOM1Q5C9Z4 860 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CLEC4DQ8WXI8 215 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RMDN3Q96TC7 470 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PTPN18Q99952 460 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CPA4Q9UI42 421 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RCOR1Q9UKL0 485 aa12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-211ENST00000538363 TCHHQ07283 1943 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 M0R2N6 131 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NEMFO60524 1076 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PEX10O60683 326 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 AOC2O75106 756 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 HSD17B4P51659 736 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 PTGDRQ13258 359 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 KIF22Q14807 665 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CALCRLQ16602 461 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 EARS2Q5JPH6 523 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 DTHD1Q6ZMT9 781 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 SYTL5Q8TDW5 730 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RAB34Q9BZG1 259 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 MAF1Q9H063 256 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
TNFRSF1A-211ENST00000538363 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 FAM155AB1AL88 458 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 IGF2BP3O00425 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 LAD1O00515 517 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CUTAO60888 179 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MBD3O95983 291 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CCND2P30279 289 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MAPK4P31152 587 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TXLNAP40222 546 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TM4SF4P48230 202 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 NASPP49321 788 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TOB1P50616 345 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 UBE2HP62256 183 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PDE4DQ08499 809 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 GSE1Q14687 1217 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 Q3C1V9 767 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PRR16Q569H4 304 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 DPP9Q86TI2 863 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SYAP1Q96A49 352 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 FERMT2Q96AC1 680 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TXNRD2Q9NNW7 524 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.48
TNFRSF1A-211ENST00000538363 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 OPLAHO14841 1288 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 STRNO43815 780 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PPP6R2O75170 966 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms