RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ICA1Q05084 483 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 CNNM4Q6P4Q7 775 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 UNC13DQ70J99 1090 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 CSGALNACT2Q8N6G5 542 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 RAD54LQ92698 747 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 GLT8D2Q9H1C3 349 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 GNG11P61952 73 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
LIMK1-208ENST00000538333 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 KCNK18Q7Z418 384 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 TMTC1Q8IUR5 882 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 GMCL1P1Q8NEA9 526 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 SNX29Q8TEQ0 813 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
LIMK1-208ENST00000538333 ARID3AQ99856 593 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 TDRD3Q9H7E2 651 aaKnown RBP15.68■□□□□ 0.1
LIMK1-208ENST00000538333 A0A0U1RQJ8 604 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 ENTPD3O75355 529 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 URI1O94763 535 aaPredicted RBP15.68■□□□□ 0.1
LIMK1-208ENST00000538333 EHHADHQ08426 723 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 ECM1Q16610 540 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 ATRIPQ8WXE1 791 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 HPS3Q969F9 1004 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 PCDHA1Q9Y5I3 950 aa15.68■□□□□ 0.1
LIMK1-208ENST00000538333 GOLGB1Q14789 3259 aaKnown RBP15.67■□□□□ 0.1
LIMK1-208ENST00000538333 F5H6K3 240 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 GDF11O95390 407 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 KRT9P35527 623 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 JAG1P78504 1218 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 KLRC3Q07444 240 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 CENPPQ6IPU0 288 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 CDK5RAP3Q96JB5 506 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 PRMT6Q96LA8 375 aaPredicted RBP15.67■□□□□ 0.1
LIMK1-208ENST00000538333 TUBGCP2Q9BSJ2 902 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 SEMA6BQ9H3T3 888 aa15.67■□□□□ 0.1
LIMK1-208ENST00000538333 MAGEC2Q9UBF1 373 aaPredicted RBP15.67■□□□□ 0.1
LIMK1-208ENST00000538333 TTC26A0AVF1 554 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 CASQ1P31415 396 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 DNM2P50570 870 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 ERCC6LQ2NKX8 1250 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 HYIQ5T013 277 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 CYP26C1Q6V0L0 522 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 CRYGNQ8WXF5 182 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 GJA10Q969M2 543 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 NAP1L4Q99733 375 aaKnown RBP15.66■□□□□ 0.1
LIMK1-208ENST00000538333 IRX2Q9BZI1 471 aaPredicted RBP15.66■□□□□ 0.1
LIMK1-208ENST00000538333 SLC39A2Q9NP94 309 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 CYP3A7-CYP3A51PA0A087WV96 503 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 MEIS2O14770 477 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 RAD21O60216 631 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 NDUFB10O96000 172 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 CYP3A7P24462 503 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 USP11P51784 963 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
LIMK1-208ENST00000538333 ZNF397Q8NF99 534 aaPredicted RBP15.66■□□□□ 0.1
LIMK1-208ENST00000538333 EEF2KMTQ96G04 330 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 CNOT6LQ96LI5 555 aaKnown RBP15.66■□□□□ 0.1
LIMK1-208ENST00000538333 P2RX7Q99572 595 aaKnown RBP15.66■□□□□ 0.1
LIMK1-208ENST00000538333 DNAJC7Q99615 494 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 ANO3Q9BYT9 981 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 KCNMB3Q9NPA1 279 aa15.66■□□□□ 0.1
LIMK1-208ENST00000538333 B4DLN1 442 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 MIIPQ5JXC2 388 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 DYMQ7RTS9 669 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 SUPT20HQ8NEM7 779 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 TTYH3Q9C0H2 523 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 CAPN11Q9UMQ6 739 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 PCDHA12Q9UN75 941 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 MRFAP1Q9Y605 127 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 NKRFO15226 690 aaKnown RBP eCLIP15.65■□□□□ 0.1
LIMK1-208ENST00000538333 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 TADA3O75528 432 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 FBXO38Q6PIJ6 1188 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 GUF1Q8N442 669 aaKnown RBP15.65■□□□□ 0.1
LIMK1-208ENST00000538333 ACRBPQ8NEB7 543 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 DDX12PQ92771 950 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
LIMK1-208ENST00000538333 RASSF10A6NK89 507 aa15.64■□□□□ 0.09
LIMK1-208ENST00000538333 GH2P01242 217 aa15.64■□□□□ 0.09
LIMK1-208ENST00000538333 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
LIMK1-208ENST00000538333 AP3B2Q13367 1082 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms