RNA–Protein interactions for RNA: ENST00000538307.1

SH2B3-202, Transcript of SH2B adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SH2B3, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-202ENST00000538307 SEMA6BQ9H3T3 888 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 NHEJ1Q9H9Q4 299 aaPredicted RBP18.78■□□□□ 0.6
SH2B3-202ENST00000538307 BLOC1S4Q9NUP1 217 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 ZNHIT6Q9NWK9 470 aaKnown RBP18.78■□□□□ 0.6
SH2B3-202ENST00000538307 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 TUBBP07437 444 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 VSNL1P62760 191 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 CALCRLQ16602 461 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 CENPPQ6IPU0 288 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
SH2B3-202ENST00000538307 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 LRWD1Q9UFC0 647 aa18.78■□□□□ 0.6
SH2B3-202ENST00000538307 FRMPD2Q68DX3 1309 aaPredicted RBP18.77■□□□□ 0.6
SH2B3-202ENST00000538307 EIF3CLB5ME19 914 aaKnown RBP18.77■□□□□ 0.6
SH2B3-202ENST00000538307 H3BQF6 201 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 ENC1O14682 589 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.6
SH2B3-202ENST00000538307 EDIL3O43854 480 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 PAPD7Q5XG87 772 aaKnown RBP18.77■□□□□ 0.6
SH2B3-202ENST00000538307 KIAA1328Q86T90 577 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 TBC1D22AQ8WUA7 517 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 JAKMIP2Q96AA8 810 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 RBM17Q96I25 401 aaKnown RBP18.77■□□□□ 0.6
SH2B3-202ENST00000538307 EIF3CQ99613 913 aaKnown RBP18.77■□□□□ 0.6
SH2B3-202ENST00000538307 SLC39A2Q9NP94 309 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 MTMR4Q9NYA4 1195 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 PLIN4Q96Q06 1357 aa18.77■□□□□ 0.6
SH2B3-202ENST00000538307 MYMKA6NI61 221 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 KRT86O43790 486 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 ATP1A1P05023 1023 aaKnown RBP18.77■□□□□ 0.59
SH2B3-202ENST00000538307 CDK17Q00537 523 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 EHBP1Q8NDI1 1231 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 COA7Q96BR5 231 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 PCMTD1Q96MG8 357 aaPredicted RBP18.77■□□□□ 0.59
SH2B3-202ENST00000538307 PODXL2Q9NZ53 605 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 HDAC6Q9UBN7 1215 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 POLLQ9UGP5 575 aa18.77■□□□□ 0.59
SH2B3-202ENST00000538307 PVALEFA0A1B0GWK0 134 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 RCCD1A6NED2 376 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 SLC37A4O43826 429 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 ADCY7P51828 1080 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 MCM6Q14566 821 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 FKBP15Q5T1M5 1219 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 UNC13DQ70J99 1090 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 NLGN1Q8N2Q7 840 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 TBC1D16Q8TBP0 767 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 LACRTQ9GZZ8 138 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 SAR1BQ9Y6B6 198 aa18.76■□□□□ 0.59
SH2B3-202ENST00000538307 TDP2O95551 362 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 SNHG28P0DPA3 235 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 ST5P78524 1137 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 WDR93Q6P2C0 686 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 LARP4BQ92615 738 aaKnown RBP18.75■□□□□ 0.59
SH2B3-202ENST00000538307 IQCDQ96DY2 449 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 GBP3Q9H0R5 595 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 DAGLAQ9Y4D2 1042 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 BBOX1O75936 387 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 IPO7O95373 1038 aaKnown RBP18.75■□□□□ 0.59
SH2B3-202ENST00000538307 GABPAQ06546 454 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 PDIA5Q14554 519 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 TMEM266Q2M3C6 531 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 SUGCTQ9HAC7 445 aa18.75■□□□□ 0.59
SH2B3-202ENST00000538307 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
SH2B3-202ENST00000538307 CDK5RAP3Q96JB5 506 aa18.74■□□□□ 0.59
SH2B3-202ENST00000538307 PURBQ96QR8 312 aaKnown RBP18.74■□□□□ 0.59
SH2B3-202ENST00000538307 MMS19Q96T76 1030 aa18.74■□□□□ 0.59
SH2B3-202ENST00000538307 PDE11AQ9HCR9 933 aa18.74■□□□□ 0.59
SH2B3-202ENST00000538307 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 SERPINB2P05120 415 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 AKR1B1P15121 316 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 HNRNPH3P31942 346 aaKnown RBP18.73■□□□□ 0.59
SH2B3-202ENST00000538307 VWA3BQ502W6 1294 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 DYMQ7RTS9 669 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 GUF1Q8N442 669 aaKnown RBP18.73■□□□□ 0.59
SH2B3-202ENST00000538307 RAD54LQ92698 747 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 SIK3Q9Y2K2 1263 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 SRGAP2O75044 1071 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 USP14P54578 494 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 GPS2Q13227 327 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 RAB34Q9BZG1 259 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 NDST4Q9H3R1 872 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 FOCADQ5VW36 1801 aa18.73■□□□□ 0.59
SH2B3-202ENST00000538307 ANO9A1A5B4 782 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 POTEMA6NI47 508 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 ZNF263O14978 683 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 EIF3JO75822 258 aaKnown RBP18.72■□□□□ 0.59
SH2B3-202ENST00000538307 VAV2P52735 878 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 CYP27A1Q02318 531 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 PICALMQ13492 652 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 CASP8Q14790 479 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 NUDT12Q9BQG2 462 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 PLAGL2Q9UPG8 496 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 DUSP10Q9Y6W6 482 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 ABCB11O95342 1321 aa18.72■□□□□ 0.59
SH2B3-202ENST00000538307 HOXA10P31260 410 aaPredicted RBP18.72■□□□□ 0.59
SH2B3-202ENST00000538307 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
SH2B3-202ENST00000538307 TMEM119Q4V9L6 283 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms