RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 PCDHA13Q9Y5I0 950 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 UBR3Q6ZT12 1888 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 IRS2Q9Y4H2 1338 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 EBAG9O00559 213 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 ZNF263O14978 683 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 ZMYND10O75800 440 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 FGFR1OPO95684 399 aaKnown RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 RFC4P35249 363 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 KLK7P49862 253 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 ANKRD40Q6AI12 368 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 RCSD1Q6JBY9 416 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 ARHGAP27Q6ZUM4 889 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 SPATA4Q8NEY3 305 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 OSBPL9Q96SU4 736 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 IFIH1Q9BYX4 1025 aaKnown RBP13.5□□□□□ -0.25
CPSF7-218ENST00000537641 TCP11L1Q9NUJ3 509 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 RNF14Q9UBS8 474 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 CAPN6Q9Y6Q1 641 aa13.5□□□□□ -0.25
CPSF7-218ENST00000537641 GRIN2DO15399 1336 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 NAV1Q8NEY1 1877 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 NMT2O60551 498 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 OR52Z1P0C646 297 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-218ENST00000537641 PLCG1P19174 1290 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 PAFAH1B1P43034 410 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 KIF11P52732 1056 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 FAM47AQ5JRC9 791 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 AEBP2Q6ZN18 517 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-218ENST00000537641 AMIGO3Q86WK7 504 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.253e-7■■■■□ 21.6
CPSF7-218ENST00000537641 ZBTB9Q96C00 473 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 STIM2Q9P246 746 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 SIK3Q9Y2K2 1263 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 ROBO3Q96MS0 1386 aa13.49□□□□□ -0.25
CPSF7-218ENST00000537641 HSF2BPO75031 334 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 ASIC1P78348 528 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 CYP27A1Q02318 531 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 MAN2A1Q16706 1144 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 VWA3BQ502W6 1294 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 CENPPQ6IPU0 288 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 FOXR2Q6PJQ5 311 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
CPSF7-218ENST00000537641 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 RASGRP4Q8TDF6 673 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 LRRC15Q8TF66 581 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 LRRC1Q9BTT6 524 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 BARHL2Q9NY43 387 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
CPSF7-218ENST00000537641 SSU72P8A0A1W2PR75 194 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 STXBP3O00186 592 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 PRDX5P30044 214 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 CCT5P48643 541 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 GTF2A1P52655 376 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 GNGT1P63211 74 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 GRAPQ13588 217 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 INF2Q27J81 1249 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 FAM182BQ5T319 152 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 MMS22LQ6ZRQ5 1243 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 RNF10Q8N5U6 811 aaKnown RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 GRAPLQ8TC17 118 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 GDAP1L1Q96MZ0 367 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 DEF6Q9H4E7 631 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 MLXIPQ9HAP2 919 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 LEMD3Q9Y2U8 911 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 DUSP10Q9Y6W6 482 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 MOCS3O95396 460 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 ADRA2BP18089 450 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 EIF4A3P38919 411 aaKnown RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 STK4Q13043 487 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 C2CD5Q86YS7 1000 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 GJD4Q96KN9 370 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-218ENST00000537641 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 FAM169AQ9Y6X4 670 aa13.47□□□□□ -0.25
CPSF7-218ENST00000537641 CDK5RAP2Q96SN8 1893 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 AKR1B10O60218 316 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 ZEB2O60315 1214 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 CYP2D6P10635 497 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 GUCY2CP25092 1073 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 MAGEA1P43355 309 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms