RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ZNF589Q86UQ0 364 aaPredicted RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 TEKT1Q969V4 418 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 PURBQ96QR8 312 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CORO1BQ9BR76 489 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RNPEPL1Q9HAU8 725 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 LUC7LQ9NQ29 371 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RMND1Q9NWS8 449 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 AGAP1Q9UPQ3 857 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 EID1Q9Y6B2 187 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 MYH8P13535 1937 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 BPIFB4P59827 614 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 PPARAQ07869 468 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 ZNF827Q17R98 1081 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 INF2Q27J81 1249 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 ATP11CQ8NB49 1132 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 ARPC5LQ9BPX5 153 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 TIPINQ9BVW5 301 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CARD9Q9H257 536 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 OCEL1Q9H607 264 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 CCDC87Q9NVE4 849 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 RHBDL2Q9NX52 303 aa9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-202ENST00000537556 UBOX5O94941 541 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 GLI1P08151 1106 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 NAT1P18440 290 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 PHEXP78562 749 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 MRPS25P82663 173 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 BEND3Q5T5X7 828 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 AACSQ86V21 672 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 HIC2Q96JB3 615 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 LARSQ9P2J5 1176 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 LIMA1Q9UHB6 759 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 LRCH1Q9Y2L9 728 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 ATP8A1Q9Y2Q0 1164 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 SH3GLB1Q9Y371 365 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 COMMD3-BMI1R4GMX3 469 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 A0A0G2JS52 829 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 MACROD2A1Z1Q3 448 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 FOXN1O15353 648 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 SKIP12755 728 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 CCT6AP40227 531 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 MAP7Q14244 749 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 MUM1Q2TAK8 710 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 PI16Q6UXB8 463 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 STKLD1Q8NE28 680 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 NCSTNQ92542 709 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 ZNF317Q96PQ6 595 aaPredicted RBP9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 DNAJC7Q99615 494 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 TRPV5Q9NQA5 729 aa9.35□□□□□ -0.91
SRGAP1-202ENST00000537556 ABCC1P33527 1531 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 HSD17B3P37058 310 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 MAGOHP61326 146 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 USP46P62068 366 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 MCL1Q07820 350 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 BNIP1Q12981 228 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 PTPAQ15257 358 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 USH1GQ495M9 461 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 NCCRP1Q6ZVX7 275 aaPredicted RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 SDR16C5Q8N3Y7 309 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 KRI1Q8N9T8 703 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 RBBP8NLQ8NC74 664 aaPredicted RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 STK32AQ8WU08 396 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 CNOT8Q9UFF9 292 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 TSKSQ9UJT2 592 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 MAGEA13PA6NCF6 341 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 SERPINB4P48594 390 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 EXOSC10Q01780 885 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 ZNF844Q08AG5 666 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 TTF1Q15361 905 aaPredicted RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 LRRC43Q8N309 656 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 PHC3Q8NDX5 983 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 AZIN2Q96A70 460 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 PBKQ96KB5 322 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 CCDC28BQ9BUN5 200 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 LACRTQ9GZZ8 138 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 ATP8A2Q9NTI2 1148 aa9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 RBM12Q9NTZ6 932 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-202ENST00000537556 A8MUI8 341 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CPLX1O14810 134 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CHGBP05060 677 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CDC25AP30304 524 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 SKIV2L2P42285 1042 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 STX17P56962 302 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 KRT31Q15323 416 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 SPA17Q15506 151 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 GALNTL6Q49A17 601 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 CCDC152Q4G0S7 254 aa9.33□□□□□ -0.92
SRGAP1-202ENST00000537556 SPATA20Q8TB22 786 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms