RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 MRPL11Q9Y3B7 192 aaKnown RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 DDX49Q9Y6V7 483 aaKnown RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 TNKSO95271 1327 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
CCDC170-202ENST00000537358 FGBP02675 491 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 ACRP10323 421 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 IFIT1BQ5T764 474 aaKnown RBP11.47□□□□□ -0.57
CCDC170-202ENST00000537358 ZNF365Q70YC5 407 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 FBXO11Q86XK2 927 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 MYLIPQ8WY64 445 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 TIFAQ96CG3 184 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 UBA5Q9GZZ9 404 aa11.47□□□□□ -0.57
CCDC170-202ENST00000537358 ALDH8A1Q9H2A2 487 aaPredicted RBP11.47□□□□□ -0.57
CCDC170-202ENST00000537358 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
CCDC170-202ENST00000537358 ERICH2A1L162 156 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 B4GALT4O60513 344 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 TXNP10599 105 aaKnown RBP11.46□□□□□ -0.57
CCDC170-202ENST00000537358 PSMC6P62333 389 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 PURAQ00577 322 aaKnown RBP11.46□□□□□ -0.57
CCDC170-202ENST00000537358 TRAF1Q13077 416 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 RAB30Q15771 203 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
CCDC170-202ENST00000537358 NSUN6Q8TEA1 469 aaKnown RBP11.46□□□□□ -0.57
CCDC170-202ENST00000537358 GAS2L1Q99501 681 aaPredicted RBP11.46□□□□□ -0.57
CCDC170-202ENST00000537358 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.57
CCDC170-202ENST00000537358 TRPV6Q9H1D0 765 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 ZNF576Q9H609 170 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 ZSWIM5Q9P217 1185 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
CCDC170-202ENST00000537358 KIAA1217Q5T5P2 1943 aa11.46□□□□□ -0.58
CCDC170-202ENST00000537358 A0A0C4DFX4 3053 aa11.46□□□□□ -0.58
CCDC170-202ENST00000537358 PFKMP08237 780 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 EDNRBP24530 442 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 CCL23P55773 120 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 SART3Q15020 963 aaKnown RBP11.45□□□□□ -0.58
CCDC170-202ENST00000537358 STXBP2Q15833 593 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 ARHGEF16Q5VV41 709 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
CCDC170-202ENST00000537358 HERVK_113Q902F9 699 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 IWS1Q96ST2 819 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 VAT1LQ9HCJ6 419 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 MYO9BQ13459 2157 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
CCDC170-202ENST00000537358 GRIN2DO15399 1336 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 A6NJR5 290 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 ZBBXA8MT70 800 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 GH1P01241 217 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 ACTN1P12814 892 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 PTGS1P23219 599 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 PTPN11Q06124 597 aaPredicted RBP11.44□□□□□ -0.58
CCDC170-202ENST00000537358 QRICH1Q2TAL8 776 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 TTC22Q5TAA0 569 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 RASIP1Q5U651 963 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 NFRKBQ6P4R8 1299 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 SEPT14Q6ZU15 432 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 C16orf59Q7L2K0 433 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 OTOP2Q7RTS6 562 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 CCDC155Q8N6L0 562 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 RETREG2Q8NC44 543 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 AMNQ9BXJ7 453 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 PBX4Q9BYU1 374 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
CCDC170-202ENST00000537358 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
CCDC170-202ENST00000537358 CUL9Q8IWT3 2517 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 CFBP00751 764 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 RFC2P35250 354 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 CHMP4BP1P59074 171 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 BFSP2Q13515 415 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 GRIN2CQ14957 1233 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 SAMD3Q8N6K7 520 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 SYTL5Q8TDW5 730 aaPredicted RBP11.43□□□□□ -0.58
CCDC170-202ENST00000537358 JMJD4Q9H9V9 463 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 SLC28A3Q9HAS3 691 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 TRMT13Q9NUP7 481 aaKnown RBP11.43□□□□□ -0.58
CCDC170-202ENST00000537358 MAP3K20Q9NYL2 800 aaKnown RBP11.43□□□□□ -0.58
CCDC170-202ENST00000537358 MYH7BA7E2Y1 1941 aa11.43□□□□□ -0.58
CCDC170-202ENST00000537358 GBF1Q92538 1859 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 UMODL1Q5DID0 1318 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 KLRF2D3W0D1 207 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 IFIT3O14879 490 aaKnown RBP11.42□□□□□ -0.58
CCDC170-202ENST00000537358 ZBTB5O15062 677 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
CCDC170-202ENST00000537358 CYP2C9P11712 490 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 CASTP20810 708 aaKnown RBP11.42□□□□□ -0.58
CCDC170-202ENST00000537358 DGKDQ16760 1214 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 KCNV1Q6PIU1 500 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 CHST3Q7LGC8 479 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 SYMPKQ92797 1274 aaKnown RBP11.42□□□□□ -0.58
CCDC170-202ENST00000537358 COPS5Q92905 334 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 TAAR1Q96RJ0 339 aa11.42□□□□□ -0.58
CCDC170-202ENST00000537358 KATNAL1Q9BW62 490 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms