RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 RASSF7Q02833 373 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 GUCY2DQ02846 1103 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 VWA3BQ502W6 1294 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 MICALCLQ6ZW33 695 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 YTHDF3Q7Z739 585 aaKnown RBP16.05■□□□□ 0.16
CDH20-202ENST00000536675 IQCDQ96DY2 449 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 KAT6BQ8WYB5 2073 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 FLT1P17948 1338 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 LRRC53A6NM62 1247 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 USP17L12C9JPN9 530 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 USP17L21D6R901 530 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 PPP1R37O75864 691 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 SEC24CP53992 1094 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 ASIC1P78348 528 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 DDR1Q08345 913 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 RRAGAQ7L523 313 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 JPH2Q9BR39 696 aaPredicted RBP16.05■□□□□ 0.16
CDH20-202ENST00000536675 MMRN2Q9H8L6 949 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
CDH20-202ENST00000536675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDH20-202ENST00000536675 CCDC194A0A1B0GVG4 234 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 M0R2N6 131 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 PCP11498 1178 aaKnown RBP16.04■□□□□ 0.16
CDH20-202ENST00000536675 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
CDH20-202ENST00000536675 PAK2Q13177 524 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 INF2Q27J81 1249 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 CD302Q8IX05 232 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 CCDC47Q96A33 483 aaKnown RBP16.04■□□□□ 0.16
CDH20-202ENST00000536675 CCT8L2Q96SF2 557 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 PCDHA6Q9UN73 950 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 PCDHA8Q9Y5H6 950 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 CYP19A1P11511 503 aaPredicted RBP16.04■□□□□ 0.16
CDH20-202ENST00000536675 HDLBPQ00341 1268 aaKnown RBP16.04■□□□□ 0.16
CDH20-202ENST00000536675 RNF187Q5TA31 235 aaPredicted RBP16.04■□□□□ 0.16
CDH20-202ENST00000536675 NLRP14Q86W24 1093 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 MREGQ8N565 214 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 CCDC155Q8N6L0 562 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 NOX5Q96PH1 765 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 NDST4Q9H3R1 872 aa16.04■□□□□ 0.16
CDH20-202ENST00000536675 SLC1A4P43007 532 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 ASTE1Q2TB18 679 aaPredicted RBP16.03■□□□□ 0.16
CDH20-202ENST00000536675 CABP7Q86V35 215 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 KIAA0895Q8NCT3 520 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 MYCBPAPQ8TBZ2 947 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 CD248Q9HCU0 757 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 MDH1P40925 334 aaKnown RBP16.03■□□□□ 0.16
CDH20-202ENST00000536675 TRADDQ15628 312 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 CASKIN2Q8WXE0 1202 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 BAP1Q92560 729 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 SLC4A9Q96Q91 983 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
CDH20-202ENST00000536675 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
CDH20-202ENST00000536675 ITGB4P16144 1822 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 COL5A2P05997 1499 aaPredicted RBP16.02■□□□□ 0.16
CDH20-202ENST00000536675 ORC4O43929 436 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 ATP2B2Q01814 1243 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
CDH20-202ENST00000536675 ZNF384Q8TF68 577 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 ATP6V1G3Q96LB4 118 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 MAGEF1Q9HAY2 307 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
CDH20-202ENST00000536675 COL1A1P02452 1464 aaPredicted RBP16.02■□□□□ 0.16
CDH20-202ENST00000536675 ZPR1O75312 459 aa16.02■□□□□ 0.15
CDH20-202ENST00000536675 DNA2P51530 1060 aa16.02■□□□□ 0.15
CDH20-202ENST00000536675 CHRNDQ07001 517 aa16.02■□□□□ 0.15
CDH20-202ENST00000536675 ACTN3Q08043 901 aaPredicted RBP16.02■□□□□ 0.15
CDH20-202ENST00000536675 TXNRD1Q16881 649 aa16.02■□□□□ 0.15
CDH20-202ENST00000536675 SUSD4Q5VX71 490 aa16.02■□□□□ 0.15
CDH20-202ENST00000536675 CLSTN1O94985 981 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 GYG1P46976 350 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 IFT88Q13099 833 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
CDH20-202ENST00000536675 CENPPQ6IPU0 288 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
CDH20-202ENST00000536675 KRT12Q99456 494 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 CARD10Q9BWT7 1032 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 SLC39A2Q9NP94 309 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 RNF14Q9UBS8 474 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 TSKSQ9UJT2 592 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 ERVV-1B6SEH8 477 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
CDH20-202ENST00000536675 PPP1R2P41236 205 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 CCDC13Q8IYE1 715 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 ZKSCAN4Q969J2 545 aaPredicted RBP16.01■□□□□ 0.15
CDH20-202ENST00000536675 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
CDH20-202ENST00000536675 HMGB1P1B2RPK0 211 aaPredicted RBP16.01■□□□□ 0.15
CDH20-202ENST00000536675 FAM107AO95990 144 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 KIF5BP33176 963 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 PRPHP41219 470 aa16.01■□□□□ 0.15
CDH20-202ENST00000536675 MAN2A1Q16706 1144 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms