RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ALDH5A1P51649 535 aaPredicted RBP14.53□□□□□ -0.08
PRKDC-207ENST00000536483 ADGRE1Q14246 886 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 NECTIN1Q15223 517 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 RAB30Q15771 203 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 DUSP28Q4G0W2 176 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 TJAP1Q5JTD0 557 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 NCOA7Q8NI08 942 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 SEZ6LQ9BYH1 1024 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 WDR11Q9BZH6 1224 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 NKX2-4Q9H2Z4 354 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 ADD3Q9UEY8 706 aaKnown RBP14.53□□□□□ -0.08
PRKDC-207ENST00000536483 RBM8AQ9Y5S9 174 aaKnown RBP14.53□□□□□ -0.08
PRKDC-207ENST00000536483 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
PRKDC-207ENST00000536483 LRRC37A2A6NM11 1700 aa14.52□□□□□ -0.08
PRKDC-207ENST00000536483 PTPDC1A2A3K4 754 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 IFIT1BQ5T764 474 aaKnown RBP14.52□□□□□ -0.09
PRKDC-207ENST00000536483 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 MB21D2Q8IYB1 491 aaPredicted RBP14.52□□□□□ -0.09
PRKDC-207ENST00000536483 CLEC4DQ8WXI8 215 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 SCLYQ96I15 445 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 CCDC136Q96JN2 1154 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 ALDH8A1Q9H2A2 487 aaPredicted RBP14.52□□□□□ -0.09
PRKDC-207ENST00000536483 SLC28A3Q9HAS3 691 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 YBX2Q9Y2T7 364 aaKnown RBP14.52□□□□□ -0.09
PRKDC-207ENST00000536483 TAF6LQ9Y6J9 622 aa14.52□□□□□ -0.09
PRKDC-207ENST00000536483 LCTP09848 1927 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 PALM3A6NDB9 673 aaPredicted RBP14.51□□□□□ -0.09
PRKDC-207ENST00000536483 IGFBP4P22692 258 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 CALML3P27482 149 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 RABGGTBP53611 331 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 CCDC85BQ15834 202 aaPredicted RBP14.51□□□□□ -0.09
PRKDC-207ENST00000536483 SLC30A10Q6XR72 485 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 RPUSD2Q8IZ73 545 aaKnown RBP14.51□□□□□ -0.09
PRKDC-207ENST00000536483 IGDCC4Q8TDY8 1250 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 MAP3K14Q99558 947 aa14.51□□□□□ -0.09
PRKDC-207ENST00000536483 TRMT13Q9NUP7 481 aaKnown RBP14.51□□□□□ -0.09
PRKDC-207ENST00000536483 CHD7Q9P2D1 2997 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 RBM47A0AV96 593 aaKnown RBP14.5□□□□□ -0.09
PRKDC-207ENST00000536483 MYL3P08590 195 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 PARP1P09874 1014 aaKnown RBP14.5□□□□□ -0.09
PRKDC-207ENST00000536483 CYP2C9P11712 490 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 ANTXR2P58335 489 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 PURAQ00577 322 aaKnown RBP14.5□□□□□ -0.09
PRKDC-207ENST00000536483 TROAPQ12815 778 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 TSGA10IPQ3SY00 556 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 RNF207Q6ZRF8 634 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 OR6J1Q8NGC5 347 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 VWCEQ96DN2 955 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 POLR3EQ9NVU0 708 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 SLC4A7Q9Y6M7 1214 aa14.5□□□□□ -0.09
PRKDC-207ENST00000536483 ZBBXA8MT70 800 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 IFIT3O14879 490 aaKnown RBP14.49□□□□□ -0.09
PRKDC-207ENST00000536483 SUPT20HL2P0C7V6 817 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 GOLGA8HP0CJ92 632 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 MYOGP15173 224 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 CPT1AP50416 773 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 RPS6P62753 249 aaKnown RBP14.49□□□□□ -0.09
PRKDC-207ENST00000536483 GHRHRQ02643 423 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 SART3Q15020 963 aaKnown RBP14.49□□□□□ -0.09
PRKDC-207ENST00000536483 RALYLQ86SE5 291 aaKnown RBP14.49□□□□□ -0.09
PRKDC-207ENST00000536483 SKAP1Q86WV1 359 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 PPP1R13LQ8WUF5 828 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 ATXN2LQ8WWM7 1075 aaKnown RBP14.49□□□□□ -0.09
PRKDC-207ENST00000536483 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 JMJD4Q9H9V9 463 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
PRKDC-207ENST00000536483 MAD2L2Q9UI95 211 aa14.49□□□□□ -0.09
PRKDC-207ENST00000536483 TNFRSF10AO00220 468 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 SLC27A2O14975 620 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 CDC45O75419 566 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 LIFRP42702 1097 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 PDE4DQ08499 809 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 TTLL4Q14679 1199 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 GRM4Q14833 912 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 FAM47CQ5HY64 1035 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 CREB3L3Q68CJ9 461 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 DEFB128Q7Z7B8 93 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 TMTC2Q8N394 836 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 DNERQ8NFT8 737 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 COPS5Q92905 334 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 MTG1Q9BT17 334 aaPredicted RBP14.48□□□□□ -0.09
PRKDC-207ENST00000536483 RIOX1Q9H6W3 641 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 THEGQ9P2T0 379 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 XIRP2A4UGR9 3374 aa14.48□□□□□ -0.09
PRKDC-207ENST00000536483 ERICH2A1L162 156 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 KLRF2D3W0D1 207 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 PFKMP08237 780 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 ATP2A2P16615 1042 aaKnown RBP14.47□□□□□ -0.09
PRKDC-207ENST00000536483 EDNRBP24530 442 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 WTAPQ15007 396 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 CDC37Q16543 378 aaPredicted RBP14.47□□□□□ -0.09
PRKDC-207ENST00000536483 NBPF20Q3BBV1 942 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 PPP2R2DQ66LE6 453 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 STAG2Q8N3U4 1231 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 SAMD3Q8N6K7 520 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms