RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC39A2Q9NP94 309 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 TMEM260Q9NX78 707 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 PLAGL2Q9UPG8 496 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 ABCB11O95342 1321 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 ENC1O14682 589 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 KLK7P49862 253 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 ST5P78524 1137 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 TBC1D16Q8TBP0 767 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 POLLQ9UGP5 575 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 ERICH4A6NGS2 130 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 MYMKA6NI61 221 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 ATP1A1P05023 1023 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 MCM3P25205 808 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 GABPAQ06546 454 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 PSMD2Q13200 908 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 VWA3BQ502W6 1294 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 FAM182BQ5T319 152 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 CCDC42Q96M95 316 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 PNMA5Q96PV4 448 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 LACRTQ9GZZ8 138 aa17.86■□□□□ 0.45
CHMP1A-202ENST00000535997 ANO9A1A5B4 782 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 LRRC63Q05C16 580 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 KIF5AQ12840 1032 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 PPP4R3AQ6IN85 833 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 FOXR2Q6PJQ5 311 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 TXLNBQ8N3L3 684 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 EXOC4Q96A65 974 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 COA7Q96BR5 231 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 PURBQ96QR8 312 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 TSGA10Q9BZW7 698 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 NDST4Q9H3R1 872 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 CALCOCO1Q9P1Z2 691 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 HDAC6Q9UBN7 1215 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 ADAM21Q9UKJ8 722 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 LY75O60449 1722 aa17.85■□□□□ 0.45
CHMP1A-202ENST00000535997 EDIL3O43854 480 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 SPA17Q15506 151 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 KRT79Q5XKE5 535 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 PDE11AQ9HCR9 933 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 PSD3Q9NYI0 1048 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 DAGLAQ9Y4D2 1042 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 FRMPD2Q68DX3 1309 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 IGKV6D-41A0A0C4DH26 115 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 PNMA6FA0A0J9YX94 578 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 RCCD1A6NED2 376 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 SERPINB2P05120 415 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 VAV2P52735 878 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 USP14P54578 494 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 CKAP4Q07065 602 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 PPP1R18Q6NYC8 613 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 RAD54LQ92698 747 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 RIC8AQ9NPQ8 531 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 TFR2Q9UP52 801 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 SUGT1Q9Y2Z0 365 aa17.84■□□□□ 0.45
CHMP1A-202ENST00000535997 H3BQF6 201 aa17.83■□□□□ 0.45
CHMP1A-202ENST00000535997 SLC37A4O43826 429 aa17.83■□□□□ 0.45
CHMP1A-202ENST00000535997 CASP8Q14790 479 aa17.83■□□□□ 0.45
CHMP1A-202ENST00000535997 MAN2A1Q16706 1144 aa17.83■□□□□ 0.45
CHMP1A-202ENST00000535997 MMS19Q96T76 1030 aa17.83■□□□□ 0.45
CHMP1A-202ENST00000535997 SIK3Q9Y2K2 1263 aa17.83■□□□□ 0.45
CHMP1A-202ENST00000535997 TARSL2A2RTX5 802 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-202ENST00000535997 TDP2O95551 362 aa17.83■□□□□ 0.44
CHMP1A-202ENST00000535997 TTLL1O95922 423 aa17.83■□□□□ 0.44
CHMP1A-202ENST00000535997 DYMQ7RTS9 669 aa17.83■□□□□ 0.44
CHMP1A-202ENST00000535997 USP21Q9UK80 565 aa17.83■□□□□ 0.44
CHMP1A-202ENST00000535997 C6orf229H3BNL8 230 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 USO1O60763 962 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 GYS1P13807 737 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 CYP27A1Q02318 531 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 EHHADHQ08426 723 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 SEPT2Q15019 361 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 JMJD4Q9H9V9 463 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 NKRFO15226 690 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 LCA5LO95447 670 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 MRPL12P52815 198 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 ZNF543Q08ER8 600 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 TMEM119Q4V9L6 283 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 SNX29Q8TEQ0 813 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 DDX12PQ92771 950 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 SECISBP2LQ93073 1101 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 ACBD3Q9H3P7 528 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 SWAP70Q9UH65 585 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 DUSP10Q9Y6W6 482 aa17.82■□□□□ 0.44
CHMP1A-202ENST00000535997 POTEMA6NI47 508 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 SRGAP2O75044 1071 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 AKR1B1P15121 316 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 GTF2IP78347 998 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 ARHGAP27Q6ZUM4 889 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 TMC4Q7Z404 712 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 ADGRF4Q8IZF3 695 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 LRRC47Q8N1G4 583 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 TRIM58Q8NG06 486 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 EDEM3Q9BZQ6 932 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 VIPAS39Q9H9C1 493 aa17.81■□□□□ 0.44
CHMP1A-202ENST00000535997 GPCPD1Q9NPB8 672 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms