RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 FAM109BQ6ICB4 259 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-202ENST00000535685 SH3RF1Q7Z6J0 888 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 MAP4K1Q92918 833 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 UBA5Q9GZZ9 404 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 ABCB11O95342 1321 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 PTPDC1A2A3K4 754 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 DCDC2CA8MYV0 355 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 B4DLN1 442 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 ARVCFO00192 962 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 ZEB2O60315 1214 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 GOLGA8HP0CJ92 632 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
CCDC60-202ENST00000535685 GHRHRQ02643 423 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 CDC37Q16543 378 aaPredicted RBP12.6□□□□□ -0.39
CCDC60-202ENST00000535685 IFIT1BQ5T764 474 aaKnown RBP12.6□□□□□ -0.39
CCDC60-202ENST00000535685 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 ADGRF4Q8IZF3 695 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 SAMD3Q8N6K7 520 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 BADQ92934 168 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
CCDC60-202ENST00000535685 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
CCDC60-202ENST00000535685 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 PDGFCQ9NRA1 345 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 MYH7BA7E2Y1 1941 aa12.6□□□□□ -0.39
CCDC60-202ENST00000535685 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 FSCN1Q16658 493 aaKnown RBP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 SLC30A10Q6XR72 485 aa12.59□□□□□ -0.39
CCDC60-202ENST00000535685 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
CCDC60-202ENST00000535685 FBXO16Q8IX29 292 aaPredicted RBP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 AP5M1Q9H0R1 490 aa12.59□□□□□ -0.39
CCDC60-202ENST00000535685 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
CCDC60-202ENST00000535685 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
CCDC60-202ENST00000535685 E7EWF7 191 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 DYNC1LI2O43237 492 aaPredicted RBP12.58□□□□□ -0.4
CCDC60-202ENST00000535685 TIMP1P01033 207 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 CD4P01730 458 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 ITGB8P26012 769 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 CALML3P27482 149 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
CCDC60-202ENST00000535685 FBXO11Q86XK2 927 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 FAM126BQ8IXS8 530 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 NCOA7Q8NI08 942 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 IWS1Q96ST2 819 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 WDR11Q9BZH6 1224 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM39AQ9NV64 488 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 MAD2L2Q9UI95 211 aa12.58□□□□□ -0.4
CCDC60-202ENST00000535685 MRPL11Q9Y3B7 192 aaKnown RBP12.58□□□□□ -0.4
CCDC60-202ENST00000535685 COL6A3P12111 3177 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 KLRF2D3W0D1 207 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 RAG1P15918 1043 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 BEX3Q00994 111 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 TROAPQ12815 778 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 TRAF1Q13077 416 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 GRM4Q14833 912 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
CCDC60-202ENST00000535685 SHHQ15465 462 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 USH1GQ495M9 461 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 MB21D2Q8IYB1 491 aaPredicted RBP12.57□□□□□ -0.4
CCDC60-202ENST00000535685 STAG2Q8N3U4 1231 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 SYTL5Q8TDW5 730 aaPredicted RBP12.57□□□□□ -0.4
CCDC60-202ENST00000535685 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 MAP3K14Q99558 947 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
CCDC60-202ENST00000535685 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
CCDC60-202ENST00000535685 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 ERICH2A1L162 156 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 ZBTB5O15062 677 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 KPNA6O60684 536 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 CPT1AP50416 773 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 HSD17B4P51659 736 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 SMAD3P84022 425 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 PDE4DQ08499 809 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 ITGA7Q13683 1181 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM63BQ5T3F8 832 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 MFSD5Q6N075 450 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 CXCL17Q6UXB2 119 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 STOX1Q6ZVD7 989 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 RALYLQ86SE5 291 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 IGDCC4Q8TDY8 1250 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 NSUN6Q8TEA1 469 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms